Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm27254-201ENSMUST00000183926 517 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm27773-201ENSMUST00000184087 78 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm29556-201ENSMUST00000187591 696 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm37300-201ENSMUST00000193327 280 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm43044-201ENSMUST00000198091 379 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm43028-201ENSMUST00000202561 481 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm44521-201ENSMUST00000206469 217 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm23510-201ENSMUST00000083083 163 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm23959-201ENSMUST00000157208 324 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm6650-201ENSMUST00000166710 614 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm27033-201ENSMUST00000183226 544 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm43774-201ENSMUST00000196327 878 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm42453-201ENSMUST00000200477 409 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm19366-201ENSMUST00000206996 156 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm44543-201ENSMUST00000209136 396 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx3-1P97436 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Nkx3-1P97436 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Mir690-201ENSMUST00000102110 109 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm11393-201ENSMUST00000118019 288 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm12885-201ENSMUST00000122246 328 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm13092-201ENSMUST00000136346 260 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm10357-201ENSMUST00000159886 264 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm16290-201ENSMUST00000161175 474 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm17159-201ENSMUST00000169043 482 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm28396-201ENSMUST00000190309 379 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm37416-201ENSMUST00000193596 318 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm36259-201ENSMUST00000197340 392 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm8703-201ENSMUST00000203793 730 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Gm46138-201ENSMUST00000215294 426 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Mir323-201ENSMUST00000083683 86 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.54□□□□□ -1.84
Nkx3-1P97436 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nkx3-1P97436 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm15785-201ENSMUST00000119145 694 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm14282-201ENSMUST00000119484 240 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm12564-201ENSMUST00000119860 321 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Clec2f-201ENSMUST00000121051 374 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm26276-201ENSMUST00000157099 109 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms