Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm44539-201ENSMUST00000206010 238 ntBASIC5.86□□□□□ -1.47
Sox1P53783 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
Sox1P53783 Gm18194-201ENSMUST00000210455 481 ntBASIC5.86□□□□□ -1.47
Sox1P53783 Gm45870-201ENSMUST00000211269 601 ntBASIC5.86□□□□□ -1.47
Sox1P53783 Gm8231-201ENSMUST00000221617 783 ntBASIC5.86□□□□□ -1.47
Sox1P53783 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.86□□□□□ -1.47
Sox1P53783 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.86□□□□□ -1.47
Sox1P53783 Gm23851-201ENSMUST00000083831 103 ntBASIC5.86□□□□□ -1.47
Sox1P53783 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Sox1P53783 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sox1P53783 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Sox1P53783 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sox1P53783 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.86□□□□□ -1.47
Sox1P53783 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.86□□□□□ -1.47
Sox1P53783 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.86□□□□□ -1.47
Sox1P53783 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.86□□□□□ -1.47
Sox1P53783 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox1P53783 Gm43718-201ENSMUST00000197524 1857 ntBASIC5.85□□□□□ -1.47
Sox1P53783 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.85□□□□□ -1.47
Sox1P53783 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Sox1P53783 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Gm38381-201ENSMUST00000193594 2275 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Gm25097-201ENSMUST00000104042 145 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Mir883a-201ENSMUST00000104824 76 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm11826-201ENSMUST00000118781 438 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm12237-201ENSMUST00000120158 470 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.85□□□□□ -1.47
Sox1P53783 Gm24192-201ENSMUST00000157978 145 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm22675-201ENSMUST00000158430 104 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Gm8161-201ENSMUST00000168739 481 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Mir7047-201ENSMUST00000184595 64 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm28973-201ENSMUST00000189310 613 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm28069-201ENSMUST00000189926 214 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm37586-201ENSMUST00000193654 204 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Gm43418-201ENSMUST00000201334 428 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm44055-201ENSMUST00000204376 247 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.85□□□□□ -1.47
Sox1P53783 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Gm7034-201ENSMUST00000218638 645 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Gm32526-201ENSMUST00000221878 981 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Sox1P53783 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox1P53783 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox1P53783 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox1P53783 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.85□□□□□ -1.47
Sox1P53783 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.84□□□□□ -1.47
Sox1P53783 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms