Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Traf1P39428 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.13□□□□□ -1.59
Traf1P39428 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Traf1P39428 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Traf1P39428 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Traf1P39428 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 Gm12190-201ENSMUST00000120001 187 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Gm13366-201ENSMUST00000122198 970 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC5.13□□□□□ -1.59
Traf1P39428 Gm26373-201ENSMUST00000157833 103 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Gm26487-201ENSMUST00000158022 94 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Gm24636-201ENSMUST00000158673 288 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.13□□□□□ -1.59
Traf1P39428 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Mir6933-201ENSMUST00000184982 81 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.13□□□□□ -1.59
Traf1P39428 Gm37102-201ENSMUST00000195740 1105 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Traf1P39428 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Traf1P39428 AC161250.1-201ENSMUST00000213426 1111 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC5.13□□□□□ -1.59
Traf1P39428 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.13□□□□□ -1.59
Traf1P39428 AC153532.1-201ENSMUST00000218126 1111 ntBASIC5.13□□□□□ -1.59
Traf1P39428 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.13□□□□□ -1.59
Traf1P39428 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.13□□□□□ -1.59
Traf1P39428 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.13□□□□□ -1.59
Traf1P39428 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Traf1P39428 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Traf1P39428 Gm24144-201ENSMUST00000082632 111 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Snord22-201ENSMUST00000083153 126 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.13□□□□□ -1.59
Traf1P39428 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Traf1P39428 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC5.13□□□□□ -1.59
Traf1P39428 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Traf1P39428 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Traf1P39428 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Traf1P39428 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Traf1P39428 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Traf1P39428 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm5391-201ENSMUST00000121155 613 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm11350-201ENSMUST00000121436 870 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm15885-201ENSMUST00000122114 388 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm25456-201ENSMUST00000157952 109 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm19898-201ENSMUST00000177490 251 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm8221-201ENSMUST00000178052 564 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Gm28500-201ENSMUST00000190286 151 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm8823-201ENSMUST00000193158 433 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Gm17967-201ENSMUST00000195319 647 ntBASIC5.12□□□□□ -1.59
Traf1P39428 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Traf1P39428 AC152062.1-201ENSMUST00000218129 386 ntBASIC5.12□□□□□ -1.59
Traf1P39428 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.12□□□□□ -1.59
Traf1P39428 AC099612.2-201ENSMUST00000226824 721 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Traf1P39428 Gm22444-201ENSMUST00000093693 108 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Traf1P39428 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Traf1P39428 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.12□□□□□ -1.59
Traf1P39428 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Traf1P39428 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Traf1P39428 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Traf1P39428 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Traf1P39428 Gm13550-201ENSMUST00000118185 525 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm9308-201ENSMUST00000119073 448 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm11448-201ENSMUST00000120427 450 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm5392-201ENSMUST00000122189 789 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm11349-201ENSMUST00000122209 1116 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm10444-201ENSMUST00000126708 148 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Traf1P39428 Gm23638-201ENSMUST00000175073 126 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm23158-201ENSMUST00000175076 126 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm22907-201ENSMUST00000175198 126 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms