Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RxraP28700 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.8□□□□□ -1.64
RxraP28700 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.8□□□□□ -1.64
RxraP28700 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.8□□□□□ -1.64
RxraP28700 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.8□□□□□ -1.64
RxraP28700 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.79□□□□□ -1.64
RxraP28700 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RxraP28700 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RxraP28700 Gm15110-201ENSMUST00000117545 881 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm13902-201ENSMUST00000120168 605 ntBASIC4.79□□□□□ -1.64
RxraP28700 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm16179-201ENSMUST00000120685 373 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm13867-201ENSMUST00000120844 395 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm15267-201ENSMUST00000120888 464 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm22478-201ENSMUST00000122570 154 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm12854-201ENSMUST00000128518 297 ntBASIC4.79□□□□□ -1.64
RxraP28700 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.79□□□□□ -1.64
RxraP28700 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.79□□□□□ -1.64
RxraP28700 Mir3090-201ENSMUST00000175597 87 ntBASIC4.79□□□□□ -1.64
RxraP28700 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Gm4617-201ENSMUST00000178993 331 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm27543-201ENSMUST00000183562 177 ntBASIC4.79□□□□□ -1.64
RxraP28700 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Gm17953-201ENSMUST00000192061 667 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm37213-201ENSMUST00000193077 586 ntBASIC4.79□□□□□ -1.64
RxraP28700 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.79□□□□□ -1.64
RxraP28700 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.79□□□□□ -1.64
RxraP28700 Gm4501-201ENSMUST00000207330 551 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm4558-201ENSMUST00000207886 521 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm4528-201ENSMUST00000207905 551 ntBASIC4.79□□□□□ -1.64
RxraP28700 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.79□□□□□ -1.64
RxraP28700 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm3690-201ENSMUST00000211341 262 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.79□□□□□ -1.64
RxraP28700 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.79□□□□□ -1.64
RxraP28700 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.79□□□□□ -1.64
RxraP28700 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.79□□□□□ -1.64
RxraP28700 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.79□□□□□ -1.64
RxraP28700 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.79□□□□□ -1.64
RxraP28700 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RxraP28700 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Gm7665-201ENSMUST00000076710 297 ntBASIC4.79□□□□□ -1.64
RxraP28700 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.79□□□□□ -1.64
RxraP28700 Gm22829-201ENSMUST00000083771 106 ntBASIC4.79□□□□□ -1.64
RxraP28700 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.79□□□□□ -1.64
RxraP28700 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RxraP28700 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RxraP28700 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RxraP28700 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RxraP28700 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.78□□□□□ -1.64
RxraP28700 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.78□□□□□ -1.64
RxraP28700 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.78□□□□□ -1.64
RxraP28700 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.78□□□□□ -1.64
RxraP28700 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RxraP28700 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RxraP28700 Gm23431-201ENSMUST00000104006 107 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RxraP28700 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm13491-201ENSMUST00000118267 235 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm14833-201ENSMUST00000118345 1027 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm22985-201ENSMUST00000122754 116 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm16254-201ENSMUST00000131528 730 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.78□□□□□ -1.64
RxraP28700 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm22940-201ENSMUST00000158560 155 ntBASIC4.78□□□□□ -1.64
RxraP28700 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Gm7335-201ENSMUST00000172475 373 ntBASIC4.78□□□□□ -1.64
RxraP28700 Mir6418-201ENSMUST00000185075 115 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm29556-201ENSMUST00000187591 696 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RxraP28700 Gm42539-201ENSMUST00000197009 308 ntBASIC4.78□□□□□ -1.64
RxraP28700 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.78□□□□□ -1.64
RxraP28700 Gm18327-201ENSMUST00000202426 830 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms