Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm24610-201ENSMUST00000083270 109 ntBASIC5.72□□□□□ -1.49
Hoxd9P28357 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd9P28357 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd9P28357 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.72□□□□□ -1.49
Hoxd9P28357 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd9P28357 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd9P28357 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd9P28357 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.72□□□□□ -1.49
Hoxd9P28357 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Hoxd9P28357 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Hoxd9P28357 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.72□□□□□ -1.49
Hoxd9P28357 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd9P28357 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd9P28357 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd9P28357 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxd9P28357 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxd9P28357 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Hoxd9P28357 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.71□□□□□ -1.5
Hoxd9P28357 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm25088-201ENSMUST00000101803 79 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm14125-201ENSMUST00000113442 680 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm12245-201ENSMUST00000117266 357 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm7429-201ENSMUST00000118664 348 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm4853-201ENSMUST00000119359 394 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm12115-201ENSMUST00000119969 447 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm13259-201ENSMUST00000120792 456 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm13998-201ENSMUST00000120952 335 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm23837-201ENSMUST00000122656 286 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm7846-201ENSMUST00000145844 274 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm16164-201ENSMUST00000160078 468 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm28263-201ENSMUST00000185884 400 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm43744-201ENSMUST00000196387 688 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm42539-201ENSMUST00000197009 308 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm44083-201ENSMUST00000203114 337 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm44059-201ENSMUST00000204048 351 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm18587-201ENSMUST00000213736 841 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Hoxd9P28357 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxd9P28357 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm22229-201ENSMUST00000082987 108 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm23451-201ENSMUST00000083328 122 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Naip3-201ENSMUST00000118082 4208 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Hoxd9P28357 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxd9P28357 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.71□□□□□ -1.5
Hoxd9P28357 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxd9P28357 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd9P28357 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd9P28357 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd9P28357 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd9P28357 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm15102-201ENSMUST00000118740 1502 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd9P28357 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Hoxd9P28357 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm15215-201ENSMUST00000117773 489 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm11925-201ENSMUST00000121375 535 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm11761-201ENSMUST00000121392 445 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm14578-201ENSMUST00000122166 391 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm6956-201ENSMUST00000134724 546 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm22538-201ENSMUST00000158169 299 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm25013-201ENSMUST00000158402 128 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Gm25365-201ENSMUST00000158852 121 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd9P28357 Snora15-201ENSMUST00000177461 131 ntBASIC5.7□□□□□ -1.5
Hoxd9P28357 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms