Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm23063-201ENSMUST00000102350 93 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Sdc1P18828 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm14816-201ENSMUST00000117174 294 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm15385-201ENSMUST00000118725 667 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm12768-201ENSMUST00000120055 759 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm13435-201ENSMUST00000120111 1023 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm16327-201ENSMUST00000137146 228 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm4487-201ENSMUST00000150617 442 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm9613-201ENSMUST00000171662 196 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Mir7220-201ENSMUST00000183978 60 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm37961-201ENSMUST00000192729 299 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.45□□□□□ -1.86
Sdc1P18828 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm38088-201ENSMUST00000195829 241 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm9480-201ENSMUST00000198038 616 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm43501-201ENSMUST00000202513 107 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm7726-201ENSMUST00000206241 231 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm7639-201ENSMUST00000212608 484 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.45□□□□□ -1.86
Sdc1P18828 AC157085.1-201ENSMUST00000216343 162 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.45□□□□□ -1.86
Sdc1P18828 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 AL807824.1-201ENSMUST00000223151 183 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 AC154616.2-201ENSMUST00000227978 398 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Sdc1P18828 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Sdc1P18828 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm22741-201ENSMUST00000083438 165 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 n-R5s46-201ENSMUST00000083960 116 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Gm10221-201ENSMUST00000088299 309 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Sdc1P18828 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.45□□□□□ -1.86
Sdc1P18828 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Sdc1P18828 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Sdc1P18828 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm23750-201ENSMUST00000104222 132 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm22498-201ENSMUST00000104497 86 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm12467-201ENSMUST00000117625 745 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm15916-201ENSMUST00000118355 736 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm14871-201ENSMUST00000119056 194 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm14335-201ENSMUST00000119165 810 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm12486-201ENSMUST00000120887 541 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm12358-201ENSMUST00000121842 520 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm16331-201ENSMUST00000144274 498 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm22210-201ENSMUST00000158101 144 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm25923-201ENSMUST00000158312 138 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm8837-201ENSMUST00000161037 1107 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm3076-201ENSMUST00000161613 451 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.44□□□□□ -1.86
Sdc1P18828 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Mir1264-201ENSMUST00000175381 86 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms