Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm25369-201ENSMUST00000158848 132 ntBASIC4.59□□□□□ -1.67
Col1a1P11087 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.59□□□□□ -1.67
Col1a1P11087 Gm28941-201ENSMUST00000185536 1017 ntBASIC4.59□□□□□ -1.67
Col1a1P11087 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col1a1P11087 Gm44355-201ENSMUST00000200417 104 ntBASIC4.59□□□□□ -1.67
Col1a1P11087 Gm32381-201ENSMUST00000203192 476 ntBASIC4.59□□□□□ -1.67
Col1a1P11087 Gm44475-201ENSMUST00000204041 424 ntBASIC4.59□□□□□ -1.67
Col1a1P11087 Gm44754-201ENSMUST00000208155 400 ntBASIC4.59□□□□□ -1.67
Col1a1P11087 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.59□□□□□ -1.67
Col1a1P11087 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col1a1P11087 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col1a1P11087 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Col1a1P11087 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Col1a1P11087 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.59□□□□□ -1.68
Col1a1P11087 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Col1a1P11087 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.68
Col1a1P11087 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Col1a1P11087 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col1a1P11087 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col1a1P11087 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 Gm13076-201ENSMUST00000118041 204 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 Gm23602-201ENSMUST00000157258 132 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 Gm23326-201ENSMUST00000157419 105 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 Gm17060-201ENSMUST00000172394 824 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col1a1P11087 Mir6938-201ENSMUST00000184173 63 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 Gm18352-201ENSMUST00000189113 902 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.58□□□□□ -1.68
Col1a1P11087 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Col1a1P11087 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col1a1P11087 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col1a1P11087 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.58□□□□□ -1.68
Col1a1P11087 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col1a1P11087 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.57□□□□□ -1.68
Col1a1P11087 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col1a1P11087 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col1a1P11087 Gm24831-201ENSMUST00000116778 126 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col1a1P11087 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col1a1P11087 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.57□□□□□ -1.68
Col1a1P11087 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
Col1a1P11087 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.57□□□□□ -1.68
Col1a1P11087 Gm43929-201ENSMUST00000203025 409 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Gm44118-201ENSMUST00000204665 229 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.57□□□□□ -1.68
Col1a1P11087 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.57□□□□□ -1.68
Col1a1P11087 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Col1a1P11087 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.57□□□□□ -1.68
Col1a1P11087 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col1a1P11087 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col1a1P11087 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col1a1P11087 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Col1a1P11087 Gm20775-201ENSMUST00000100115 1851 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col1a1P11087 Gm43466-201ENSMUST00000197836 5214 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.57□□□□□ -1.68
Col1a1P11087 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col1a1P11087 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col1a1P11087 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col1a1P11087 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm25835-201ENSMUST00000158917 144 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm7946-201ENSMUST00000203326 958 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Gm45080-201ENSMUST00000206648 283 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col1a1P11087 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm24626-201ENSMUST00000082621 161 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Mir101b-201ENSMUST00000083622 97 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col1a1P11087 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col1a1P11087 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.56□□□□□ -1.68
Col1a1P11087 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm14975-201ENSMUST00000118741 664 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 120.1 ms