Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hcn3O88705 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hcn3O88705 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hcn3O88705 Gm29038-201ENSMUST00000191543 678 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.73□□□□□ -1.65
Hcn3O88705 Gm37946-201ENSMUST00000192064 347 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hcn3O88705 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.73□□□□□ -1.65
Hcn3O88705 Gm33601-201ENSMUST00000210001 961 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hcn3O88705 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.73□□□□□ -1.65
Hcn3O88705 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hcn3O88705 Mir133b-201ENSMUST00000083546 119 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Mir449a-201ENSMUST00000083641 91 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hcn3O88705 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hcn3O88705 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hcn3O88705 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.73□□□□□ -1.65
Hcn3O88705 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hcn3O88705 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hcn3O88705 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hcn3O88705 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm11975-201ENSMUST00000118772 481 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm13537-201ENSMUST00000120467 267 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm13865-201ENSMUST00000120957 865 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm25176-201ENSMUST00000122640 125 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm23959-201ENSMUST00000157208 324 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm27428-201ENSMUST00000184289 110 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Mir7687-201ENSMUST00000184722 59 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm28429-201ENSMUST00000188521 363 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm37243-201ENSMUST00000193407 595 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm10048-201ENSMUST00000194196 372 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm44449-201ENSMUST00000203610 153 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm4501-201ENSMUST00000207330 551 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm4558-201ENSMUST00000207886 521 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm4528-201ENSMUST00000207905 551 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm19936-201ENSMUST00000216414 838 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.72□□□□□ -1.65
Hcn3O88705 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.72□□□□□ -1.65
Hcn3O88705 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.72□□□□□ -1.65
Hcn3O88705 CT010505.1-201ENSMUST00000227026 396 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hcn3O88705 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm4963-201ENSMUST00000072718 378 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hcn3O88705 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm25404-201ENSMUST00000082970 107 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm23677-201ENSMUST00000083156 104 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Hcn3O88705 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hcn3O88705 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Hcn3O88705 Gm7133-201ENSMUST00000187797 2039 ntBASIC4.72□□□□□ -1.65
Hcn3O88705 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hcn3O88705 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.71□□□□□ -1.65
Hcn3O88705 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Hcn3O88705 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Hcn3O88705 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms