Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.36□□□□□ -1.71
Shisa8J3QNX5 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shisa8J3QNX5 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Mir466n-201ENSMUST00000104798 94 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm14385-201ENSMUST00000116315 876 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm14220-201ENSMUST00000118114 449 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm14046-201ENSMUST00000119389 509 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm11790-201ENSMUST00000119569 455 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm13508-201ENSMUST00000121639 775 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm13555-201ENSMUST00000121668 319 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm11507-201ENSMUST00000156462 412 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm11392-201ENSMUST00000181419 710 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm18448-201ENSMUST00000186286 599 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm28191-201ENSMUST00000189112 211 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm9632-201ENSMUST00000195934 643 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm9236-201ENSMUST00000196892 587 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm9332-201ENSMUST00000198431 730 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm18327-201ENSMUST00000202426 830 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm44779-201ENSMUST00000206937 708 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm45189-201ENSMUST00000208567 363 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm33601-201ENSMUST00000210001 961 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC161426.1-201ENSMUST00000214137 286 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC116465.1-201ENSMUST00000220324 235 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm9386-201ENSMUST00000095195 381 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Shisa8J3QNX5 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Shisa8J3QNX5 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms