Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 AC192616.2-201ENSMUST00000221482 3841 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm22956-201ENSMUST00000122520 80 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm24734-201ENSMUST00000158860 262 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm6680-201ENSMUST00000192789 950 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 AC156798.1-201ENSMUST00000220508 224 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Col6a3E9PWQ3 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Col6a3E9PWQ3 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Col6a3E9PWQ3 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Col6a3E9PWQ3 Gm16005-201ENSMUST00000120515 269 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm19503-201ENSMUST00000187109 241 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm37250-201ENSMUST00000194919 2388 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm12564-201ENSMUST00000119860 321 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm38075-201ENSMUST00000191979 920 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm18384-201ENSMUST00000195974 808 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm8681-201ENSMUST00000219115 618 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm12226-201ENSMUST00000144172 876 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm22156-201ENSMUST00000158409 141 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm18597-201ENSMUST00000209519 694 ntBASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a3E9PWQ3 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm18843-201ENSMUST00000194982 719 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm13854-201ENSMUST00000121183 1679 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm44518-201ENSMUST00000208080 4370 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm16303-201ENSMUST00000161498 390 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Mir3471-2-201ENSMUST00000174896 102 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm42593-201ENSMUST00000198469 377 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm18617-201ENSMUST00000222311 259 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms