Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm24079-201ENSMUST00000104352 132 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm11799-201ENSMUST00000116110 460 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm15016-201ENSMUST00000117300 720 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm12939-201ENSMUST00000117303 165 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm12040-201ENSMUST00000118357 537 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm12565-201ENSMUST00000119004 649 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm14531-201ENSMUST00000120845 285 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm25428-201ENSMUST00000157608 114 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm17121-201ENSMUST00000170414 847 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm17048-201ENSMUST00000179266 847 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm17222-201ENSMUST00000180135 847 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm27402-201ENSMUST00000183890 120 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm18117-201ENSMUST00000187720 742 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm28996-201ENSMUST00000190316 721 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm5284-201ENSMUST00000199053 903 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm18541-201ENSMUST00000215935 538 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Glycam1-204ENSMUST00000228895 641 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Snord68-201ENSMUST00000082516 86 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.69□□□□□ -1.5
Trim39Q9ESN2 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm14359-201ENSMUST00000118883 424 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm12787-201ENSMUST00000119234 396 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm14804-201ENSMUST00000122322 508 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm8207-201ENSMUST00000171204 502 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Mir5128-201ENSMUST00000175217 84 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm8296-201ENSMUST00000185597 524 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms