Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Gm6863-201ENSMUST00000052882 636 ntBASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Cdc40Q9DC48 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdc40Q9DC48 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Gm45517-201ENSMUST00000209973 2468 ntBASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdc40Q9DC48 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm15923-201ENSMUST00000119300 1169 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm13677-201ENSMUST00000120739 595 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm25553-201ENSMUST00000158076 79 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm18522-201ENSMUST00000173947 650 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm5660-201ENSMUST00000197453 1149 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm44002-201ENSMUST00000205134 594 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm45727-201ENSMUST00000212886 572 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 AC110816.1-201ENSMUST00000218559 980 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm23510-201ENSMUST00000083083 163 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 AC129085.3-201ENSMUST00000225686 1705 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Cdc40Q9DC48 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
Cdc40Q9DC48 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.96□□□□□ -1.77
Cdc40Q9DC48 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.96□□□□□ -1.77
Cdc40Q9DC48 Synpr-207ENSMUST00000223583 3362 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm14107-201ENSMUST00000117774 330 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm13501-201ENSMUST00000118477 979 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm14753-201ENSMUST00000118503 246 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm13785-201ENSMUST00000119099 690 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm12087-201ENSMUST00000121878 258 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm15212-201ENSMUST00000122403 466 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm22613-201ENSMUST00000122679 292 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm13092-201ENSMUST00000136346 260 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm23743-201ENSMUST00000157389 274 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm22588-201ENSMUST00000157510 140 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm25386-201ENSMUST00000157814 288 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Mir5134-201ENSMUST00000175529 78 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm43586-201ENSMUST00000195948 310 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Gm42566-201ENSMUST00000197120 643 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 BC023105-201ENSMUST00000073997 1227 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.96□□□□□ -1.78
Cdc40Q9DC48 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cdc40Q9DC48 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm15361-201ENSMUST00000119320 444 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm6969-201ENSMUST00000140065 342 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm24939-201ENSMUST00000158325 137 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms