Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm23319-201ENSMUST00000104467 131 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm12252-201ENSMUST00000119517 219 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm14714-201ENSMUST00000119743 439 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm5974-201ENSMUST00000181607 986 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Mir7658-201ENSMUST00000184043 57 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Mir7047-201ENSMUST00000184595 64 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm37837-201ENSMUST00000191743 604 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc3Q9D6Y1 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm10241-201ENSMUST00000117664 286 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm15212-201ENSMUST00000122403 466 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm23960-201ENSMUST00000157206 131 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm24505-201ENSMUST00000157682 126 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm24998-201ENSMUST00000157908 89 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm22156-201ENSMUST00000158409 141 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Mir6345-201ENSMUST00000184286 128 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm43853-201ENSMUST00000197162 301 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm7468-201ENSMUST00000203900 652 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm19073-201ENSMUST00000219978 555 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm6195-201ENSMUST00000063059 357 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Mir323-201ENSMUST00000083683 86 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.04□□□□□ -1.76
Ccdc3Q9D6Y1 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm23098-201ENSMUST00000157552 299 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms