Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 AC116557.1-201ENSMUST00000219494 1521 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Mir466b-8-201ENSMUST00000103883 86 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm24709-201ENSMUST00000104123 132 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm16431-201ENSMUST00000117454 431 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm14594-201ENSMUST00000118052 537 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm14590-201ENSMUST00000118934 537 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm12340-201ENSMUST00000121617 462 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm4487-201ENSMUST00000150617 442 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm29231-201ENSMUST00000179850 319 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm14596-201ENSMUST00000180268 537 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm14595-201ENSMUST00000180335 537 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm27679-201ENSMUST00000184612 84 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm27148-201ENSMUST00000185086 160 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm28094-201ENSMUST00000185262 390 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Mir466e-201ENSMUST00000198862 84 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Mir466c-1-201ENSMUST00000200654 84 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 n-R5s37-201ENSMUST00000082533 118 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm24144-201ENSMUST00000082632 111 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm22365-201ENSMUST00000093750 117 ntBASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim11Q99PQ2 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm11813-201ENSMUST00000118586 291 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm6175-201ENSMUST00000121351 400 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm8761-201ENSMUST00000121507 955 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm15141-201ENSMUST00000121860 729 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm12833-201ENSMUST00000136112 477 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm25335-201ENSMUST00000158043 103 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm16102-201ENSMUST00000160955 420 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm18343-201ENSMUST00000172802 604 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm20519-201ENSMUST00000173684 359 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm25525-201ENSMUST00000177701 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm26178-201ENSMUST00000177706 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm26465-201ENSMUST00000178517 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm24317-201ENSMUST00000178536 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm25021-201ENSMUST00000179184 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm22995-201ENSMUST00000179670 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm24424-201ENSMUST00000179714 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm24389-201ENSMUST00000179962 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm25672-201ENSMUST00000180111 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Mir6541-201ENSMUST00000183649 110 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm29163-201ENSMUST00000188029 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm8419-201ENSMUST00000189886 412 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm37455-201ENSMUST00000191993 529 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm44539-201ENSMUST00000206010 238 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm45727-201ENSMUST00000212886 572 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm23815-201ENSMUST00000083231 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm23520-201ENSMUST00000093736 107 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Trim11Q99PQ2 Gm20172-201ENSMUST00000193138 1551 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms