Protein–RNA interactions for Protein: Q99J79

Ddb2, DNA damage-binding protein 2, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb2Q99J79 Gm8595-201ENSMUST00000118250 630 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm13537-201ENSMUST00000120467 267 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm14601-201ENSMUST00000120892 236 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm24186-201ENSMUST00000157983 127 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Mir1963-201ENSMUST00000158594 59 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm22076-201ENSMUST00000158601 84 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm25942-201ENSMUST00000180080 110 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Mir7687-201ENSMUST00000184722 59 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm20770-201ENSMUST00000193474 694 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm33952-201ENSMUST00000197795 408 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm43116-201ENSMUST00000199789 195 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm17906-201ENSMUST00000202480 901 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm45690-201ENSMUST00000210775 246 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 AC131720.2-201ENSMUST00000220420 431 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm3800-201ENSMUST00000221086 554 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm6056-201ENSMUST00000221253 488 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm9269-201ENSMUST00000221661 578 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 AV026068-237ENSMUST00000226075 572 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm23242-201ENSMUST00000083055 107 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm23459-201ENSMUST00000083259 131 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm24765-201ENSMUST00000083691 103 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.62□□□□□ -1.67
Ddb2Q99J79 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb2Q99J79 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm25595-201ENSMUST00000102273 97 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm23133-201ENSMUST00000104255 135 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Lipe-203ENSMUST00000105177 1251 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm12641-201ENSMUST00000117874 985 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm15531-201ENSMUST00000118062 252 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm14534-201ENSMUST00000120045 357 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm11522-201ENSMUST00000120533 176 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm13077-201ENSMUST00000121941 484 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm25348-201ENSMUST00000158961 111 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.61□□□□□ -1.67
Ddb2Q99J79 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm28474-201ENSMUST00000188501 315 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm37882-201ENSMUST00000195254 196 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb2Q99J79 Gm8719-201ENSMUST00000203602 534 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms