Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm25135-201ENSMUST00000082648 143 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Mir133b-201ENSMUST00000083546 119 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 AC126033.1-201ENSMUST00000227628 6773 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm24350-201ENSMUST00000104163 133 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm15490-201ENSMUST00000119894 387 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm11481-201ENSMUST00000120069 255 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm13502-201ENSMUST00000121574 684 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm25179-201ENSMUST00000122632 128 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm22596-201ENSMUST00000157601 316 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Mir3110-201ENSMUST00000175053 80 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm14527-201ENSMUST00000179300 639 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm29184-201ENSMUST00000190038 334 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm35570-201ENSMUST00000198730 681 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm42526-201ENSMUST00000198956 393 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 AC168880.1-201ENSMUST00000225113 707 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Olfr815-201ENSMUST00000071557 951 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm6462-201ENSMUST00000081488 304 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm23330-201ENSMUST00000082660 164 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm25139-201ENSMUST00000083247 210 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc9Q8VC31 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm25537-201ENSMUST00000103851 109 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm24340-201ENSMUST00000104208 97 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm13677-201ENSMUST00000120739 595 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm12807-201ENSMUST00000121546 962 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm22343-201ENSMUST00000122648 286 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm16259-201ENSMUST00000145241 553 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm6113-201ENSMUST00000180319 639 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm4557-201ENSMUST00000185826 907 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm28503-201ENSMUST00000185966 147 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm4526-201ENSMUST00000186039 920 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm8708-201ENSMUST00000188500 906 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm44212-201ENSMUST00000205016 897 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm44543-201ENSMUST00000209136 396 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 AC147615.1-201ENSMUST00000218914 441 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm4057-201ENSMUST00000221407 368 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 AC167192.1-201ENSMUST00000225908 139 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc9Q8VC31 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc9Q8VC31 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.47□□□□□ -1.53
Ccdc9Q8VC31 Gm14445-201ENSMUST00000117051 1484 ntBASIC5.47□□□□□ -1.53
Ccdc9Q8VC31 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms