Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Atg4aQ8C9S8 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.99□□□□□ -1.61
Atg4aQ8C9S8 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Atg4aQ8C9S8 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.99□□□□□ -1.61
Atg4aQ8C9S8 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.99□□□□□ -1.61
Atg4aQ8C9S8 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Atg4aQ8C9S8 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Atg4aQ8C9S8 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm23322-201ENSMUST00000104464 167 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm14554-201ENSMUST00000119548 661 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm13059-201ENSMUST00000119881 398 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm14563-201ENSMUST00000120571 354 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm13852-201ENSMUST00000122350 242 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm3160-201ENSMUST00000128343 607 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm23171-201ENSMUST00000157159 264 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm22398-201ENSMUST00000174941 125 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm25731-201ENSMUST00000175167 125 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Mir5128-201ENSMUST00000175217 84 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm30280-201ENSMUST00000192214 262 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm37533-201ENSMUST00000193848 545 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm44623-201ENSMUST00000207934 434 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm19196-201ENSMUST00000209258 357 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Atg4aQ8C9S8 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm24318-201ENSMUST00000104490 131 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Mir466i-201ENSMUST00000116924 121 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm12994-201ENSMUST00000119601 447 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm22637-201ENSMUST00000158144 283 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Mir6963-201ENSMUST00000183535 71 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm28396-201ENSMUST00000190309 379 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm38270-201ENSMUST00000192721 407 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 AC159476.2-201ENSMUST00000216221 418 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Mir28a-201ENSMUST00000083560 86 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm25005-201ENSMUST00000083812 156 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Atg4aQ8C9S8 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Atg4aQ8C9S8 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Atg4aQ8C9S8 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Atg4aQ8C9S8 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Atg4aQ8C9S8 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Atg4aQ8C9S8 Gm22472-201ENSMUST00000104115 134 ntBASIC4.96□□□□□ -1.62
Atg4aQ8C9S8 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Atg4aQ8C9S8 Gm7618-201ENSMUST00000121643 171 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms