Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm22834-201ENSMUST00000102021 79 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm14428-201ENSMUST00000120408 822 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm12094-201ENSMUST00000121781 472 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm22791-201ENSMUST00000157232 145 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm23124-201ENSMUST00000157650 107 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Mirt2-201ENSMUST00000175179 285 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm22569-201ENSMUST00000175545 124 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm8941-201ENSMUST00000181451 899 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Mir7008-201ENSMUST00000184398 63 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm28098-201ENSMUST00000191361 699 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm36984-201ENSMUST00000192770 235 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm37881-201ENSMUST00000193001 421 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm19060-201ENSMUST00000201959 421 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 AC154467.1-201ENSMUST00000227527 449 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 AC166369.1-201ENSMUST00000228126 351 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm26447-201ENSMUST00000082448 129 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm23502-201ENSMUST00000083902 145 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.59□□□□□ -1.35
Trim47Q8C0E3 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim47Q8C0E3 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Trim47Q8C0E3 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Trim47Q8C0E3 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Trim47Q8C0E3 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm5653-201ENSMUST00000223393 1337 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm15994-201ENSMUST00000118029 402 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm13345-201ENSMUST00000121928 228 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm25826-201ENSMUST00000157090 137 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm23662-201ENSMUST00000158046 111 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm22724-201ENSMUST00000158091 127 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm22210-201ENSMUST00000158101 144 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm27676-201ENSMUST00000183669 61 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Mir6413-201ENSMUST00000184049 108 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm29475-201ENSMUST00000190767 312 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm38183-201ENSMUST00000193189 205 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm44316-201ENSMUST00000199274 97 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm45209-201ENSMUST00000207122 353 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm36501-201ENSMUST00000221857 745 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 CT485612.2-201ENSMUST00000223014 151 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms