Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm25200-201ENSMUST00000083094 130 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm11566-201ENSMUST00000118550 203 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm12379-201ENSMUST00000119607 391 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm15075-201ENSMUST00000122187 477 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Mir6414-201ENSMUST00000183685 82 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm27160-201ENSMUST00000184837 199 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 AC211878.5-201ENSMUST00000221697 409 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm23518-201ENSMUST00000082835 153 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Snord14e-201ENSMUST00000082857 90 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Mir30e-201ENSMUST00000083475 92 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.05□□□□□ -1.76
Trub1Q8C0D0 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm13831-201ENSMUST00000118764 302 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm15267-201ENSMUST00000120888 464 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm11506-201ENSMUST00000122414 470 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm24850-201ENSMUST00000158029 119 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm38201-201ENSMUST00000192143 387 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm25481-201ENSMUST00000083221 158 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trub1Q8C0D0 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Mir551b-201ENSMUST00000102165 98 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Mir193b-201ENSMUST00000103784 79 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm23481-201ENSMUST00000104173 131 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm11877-201ENSMUST00000118921 852 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm15377-201ENSMUST00000119594 246 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm12849-201ENSMUST00000120013 739 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm6058-201ENSMUST00000154261 399 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm16303-201ENSMUST00000161498 390 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm20203-201ENSMUST00000192352 332 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm43925-201ENSMUST00000203498 206 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 Gm44773-201ENSMUST00000207374 557 ntBASIC4.03□□□□□ -1.76
Trub1Q8C0D0 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms