Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm23424-201ENSMUST00000103889 110 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm14541-201ENSMUST00000118985 157 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm11366-201ENSMUST00000119279 429 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm13007-201ENSMUST00000121866 365 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm23957-201ENSMUST00000157209 90 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm23513-201ENSMUST00000158181 133 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Scarna6-201ENSMUST00000158656 265 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Mir6903-201ENSMUST00000183597 88 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm43631-201ENSMUST00000202011 369 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm44389-201ENSMUST00000203795 182 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm45034-201ENSMUST00000206831 482 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm29884-201ENSMUST00000218403 453 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Gm18441-201ENSMUST00000223539 617 ntBASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc40Q8BI79 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.59□□□□□ -1.68
Ccdc40Q8BI79 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Ccdc40Q8BI79 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.59□□□□□ -1.68
Ccdc40Q8BI79 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm11914-201ENSMUST00000117094 507 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm15180-201ENSMUST00000117745 492 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm15951-201ENSMUST00000118377 400 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm8757-201ENSMUST00000119660 372 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm13430-201ENSMUST00000121366 288 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm14126-201ENSMUST00000122345 395 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm26187-201ENSMUST00000157693 101 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm16490-201ENSMUST00000165299 351 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm42999-201ENSMUST00000198049 786 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm9245-201ENSMUST00000200528 983 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm7407-201ENSMUST00000208301 568 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm45189-201ENSMUST00000208567 363 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm23455-201ENSMUST00000083331 100 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.58□□□□□ -1.68
Ccdc40Q8BI79 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.57□□□□□ -1.68
Ccdc40Q8BI79 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ccdc40Q8BI79 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ccdc40Q8BI79 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.57□□□□□ -1.68
Ccdc40Q8BI79 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ccdc40Q8BI79 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Ccdc40Q8BI79 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC4.57□□□□□ -1.68
Ccdc40Q8BI79 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc40Q8BI79 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms