Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm24303-201ENSMUST00000178237 126 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm29124-201ENSMUST00000186576 452 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm29045-201ENSMUST00000187278 698 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm28061-201ENSMUST00000189085 807 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm8419-201ENSMUST00000189886 412 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm37308-201ENSMUST00000194684 100 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm37235-201ENSMUST00000195171 59 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm38008-201ENSMUST00000195333 518 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm7181-201ENSMUST00000202197 434 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm44134-202ENSMUST00000204777 545 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm18194-201ENSMUST00000210455 481 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm45628-201ENSMUST00000210849 274 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm23737-201ENSMUST00000082547 159 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm24037-201ENSMUST00000082871 180 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm23678-201ENSMUST00000083157 107 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm23461-201ENSMUST00000083265 107 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh19Q80TF3 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Mir883a-201ENSMUST00000104824 76 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm14125-201ENSMUST00000113442 680 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm14605-201ENSMUST00000120599 268 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm23118-201ENSMUST00000122657 187 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm22819-201ENSMUST00000157445 303 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm22569-201ENSMUST00000175545 124 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm26177-201ENSMUST00000178683 107 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm27030-201ENSMUST00000182551 464 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Mir7685-201ENSMUST00000183555 62 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm37455-201ENSMUST00000191993 529 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm38046-201ENSMUST00000192733 550 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm2623-201ENSMUST00000199229 286 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm3800-201ENSMUST00000221086 554 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm3867-201ENSMUST00000086108 279 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.78□□□□□ -1.48
Pcdh19Q80TF3 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Pcdh19Q80TF3 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Pcdh19Q80TF3 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Pcdh19Q80TF3 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Pcdh19Q80TF3 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms