Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm11313-201ENSMUST00000118779 432 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm17075-201ENSMUST00000171924 670 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm24019-201ENSMUST00000178620 107 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm26243-201ENSMUST00000179260 107 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm6240-201ENSMUST00000208014 473 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm6841-201ENSMUST00000220602 598 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm23296-201ENSMUST00000082555 107 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm24859-201ENSMUST00000082729 107 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm43466-201ENSMUST00000197836 5214 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Gm650-201ENSMUST00000144428 1551 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC3.52□□□□□ -1.85
Rif1Q6PR54 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Rif1Q6PR54 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm44894-201ENSMUST00000205280 2174 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm14825-201ENSMUST00000113538 701 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm13873-201ENSMUST00000119208 427 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm26027-201ENSMUST00000122725 268 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm15946-201ENSMUST00000160654 423 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm29664-201ENSMUST00000191125 463 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm43282-201ENSMUST00000201848 2157 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm12902-201ENSMUST00000118389 322 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm17046-201ENSMUST00000168078 850 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Rif1Q6PR54 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 AC122188.1-201ENSMUST00000217534 312 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Rif1Q6PR54 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Rif1Q6PR54 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC3.51□□□□□ -1.85
Rif1Q6PR54 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 AC113059.3-201ENSMUST00000217423 2777 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Gm25392-201ENSMUST00000157335 297 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 CT485612.3-201ENSMUST00000222179 408 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Gm25200-201ENSMUST00000083094 130 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Gm8260-201ENSMUST00000119230 353 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 Gm4914-201ENSMUST00000119757 459 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 Mir6938-201ENSMUST00000184173 63 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Gm17811-201ENSMUST00000206193 387 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 AC164092.3-201ENSMUST00000216970 1323 ntBASIC3.5□□□□□ -1.85
Rif1Q6PR54 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rif1Q6PR54 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rif1Q6PR54 Gm37010-201ENSMUST00000194539 1704 ntBASIC3.49□□□□□ -1.85
Rif1Q6PR54 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Rif1Q6PR54 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.49□□□□□ -1.85
Rif1Q6PR54 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Rif1Q6PR54 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.49□□□□□ -1.85
Rif1Q6PR54 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Rif1Q6PR54 Gm9836-201ENSMUST00000117132 216 ntBASIC3.49□□□□□ -1.85
Rif1Q6PR54 Gm16125-201ENSMUST00000159003 339 ntBASIC3.49□□□□□ -1.85
Rif1Q6PR54 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rif1Q6PR54 Gm29598-201ENSMUST00000188996 588 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms