Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Trim28Q62318 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm43185-201ENSMUST00000197507 2775 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim28Q62318 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 AC154184.1-201ENSMUST00000224375 1620 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm9320-201ENSMUST00000184151 473 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim28Q62318 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm37771-201ENSMUST00000193121 265 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm19649-201ENSMUST00000201126 822 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Gm43578-201ENSMUST00000201250 459 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Gm29815-201ENSMUST00000202418 178 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Gm44261-201ENSMUST00000203337 209 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim28Q62318 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim28Q62318 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm7808-201ENSMUST00000082002 387 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Gm25475-201ENSMUST00000082825 180 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim28Q62318 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim28Q62318 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim28Q62318 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim28Q62318 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Trim28Q62318 AC103672.3-201ENSMUST00000227649 3243 ntBASIC6.01□□□□□ -1.45
Trim28Q62318 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim28Q62318 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim28Q62318 Gm10997-201ENSMUST00000210294 1500 ntBASIC6□□□□□ -1.45
Trim28Q62318 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim28Q62318 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC6□□□□□ -1.45
Trim28Q62318 Mir466i-201ENSMUST00000116924 121 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm12393-201ENSMUST00000117084 848 ntBASIC6□□□□□ -1.45
Trim28Q62318 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm13607-201ENSMUST00000117875 539 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm11878-201ENSMUST00000117908 400 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm13787-201ENSMUST00000120422 168 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm24840-201ENSMUST00000122603 147 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm23111-201ENSMUST00000122652 105 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm16359-201ENSMUST00000124511 289 ntBASIC6□□□□□ -1.45
Trim28Q62318 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC6□□□□□ -1.45
Trim28Q62318 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm23743-201ENSMUST00000157389 274 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm26393-201ENSMUST00000157625 129 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm22555-201ENSMUST00000157801 62 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm23022-201ENSMUST00000158768 180 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm3084-201ENSMUST00000169967 598 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC6□□□□□ -1.45
Trim28Q62318 Gm34015-201ENSMUST00000194908 451 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm4859-201ENSMUST00000199625 787 ntBASIC6□□□□□ -1.45
Trim28Q62318 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC6□□□□□ -1.45
Trim28Q62318 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC6□□□□□ -1.45
Trim28Q62318 Gm7240-201ENSMUST00000220769 664 ntBASIC6□□□□□ -1.45
Trim28Q62318 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC6□□□□□ -1.45
Trim28Q62318 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim28Q62318 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim28Q62318 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim28Q62318 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim28Q62318 Gm22977-201ENSMUST00000082615 107 ntBASIC6□□□□□ -1.45
Trim28Q62318 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim28Q62318 Gm29730-201ENSMUST00000192986 1396 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm43282-201ENSMUST00000201848 2157 ntBASIC6□□□□□ -1.45
Trim28Q62318 Gm43781-201ENSMUST00000197634 2681 ntBASIC6□□□□□ -1.45
Trim28Q62318 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim28Q62318 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Trim28Q62318 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Trim28Q62318 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim28Q62318 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim28Q62318 Gm15058-201ENSMUST00000117689 458 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Gm11698-201ENSMUST00000117948 455 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim28Q62318 Gm23897-201ENSMUST00000158110 158 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim28Q62318 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim28Q62318 Gm26933-201ENSMUST00000182320 827 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms