Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm14871-201ENSMUST00000119056 194 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm14106-201ENSMUST00000119382 438 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm14534-201ENSMUST00000120045 357 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm11388-201ENSMUST00000120908 159 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm11925-201ENSMUST00000121375 535 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm24103-201ENSMUST00000174930 77 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm6068-201ENSMUST00000222270 387 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm42541-201ENSMUST00000199871 2249 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm23431-201ENSMUST00000104006 107 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm23537-201ENSMUST00000157536 330 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm22136-201ENSMUST00000158751 268 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm21809-201ENSMUST00000178495 468 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm17412-201ENSMUST00000179261 468 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm37308-201ENSMUST00000194684 100 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 AC211878.2-201ENSMUST00000222486 488 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 AC156802.1-201ENSMUST00000223623 579 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 AC166369.2-201ENSMUST00000228403 308 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 AC170600.1-201ENSMUST00000228763 277 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm43611-201ENSMUST00000196656 4352 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm37132-201ENSMUST00000195553 2238 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Trim41Q5NCC3 AC122024.1-201ENSMUST00000219276 4850 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC10.33□□□□□ -0.76
Trim41Q5NCC3 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm43330-201ENSMUST00000199706 2153 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm38299-201ENSMUST00000193214 3789 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm14895-201ENSMUST00000121858 1361 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm13880-201ENSMUST00000118421 474 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm11313-201ENSMUST00000118779 432 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm26486-201ENSMUST00000158021 110 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm23631-201ENSMUST00000175291 123 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm21816-201ENSMUST00000179255 360 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm27676-201ENSMUST00000183669 61 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm27679-201ENSMUST00000184612 84 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 AC163033.1-201ENSMUST00000218608 157 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 AC166369.1-201ENSMUST00000228126 351 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 n-R5s161-201ENSMUST00000083728 114 ntBASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trim41Q5NCC3 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Trim41Q5NCC3 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trim41Q5NCC3 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim41Q5NCC3 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim41Q5NCC3 Gm4541-201ENSMUST00000208901 1848 ntBASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms