Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm28396-201ENSMUST00000190309 379 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm28803-201ENSMUST00000190385 764 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm18843-201ENSMUST00000194982 719 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm44354-201ENSMUST00000196017 143 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm44852-201ENSMUST00000207950 369 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 AV026068-224ENSMUST00000224827 928 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm26449-201ENSMUST00000082452 104 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Mir34b-201ENSMUST00000083558 84 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm11281-201ENSMUST00000141391 576 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm6245-201ENSMUST00000164699 768 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Mir7074-201ENSMUST00000183884 63 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm30280-201ENSMUST00000192214 262 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm8939-201ENSMUST00000192577 964 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm9472-201ENSMUST00000221625 526 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3bQ3ULL6 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm22472-201ENSMUST00000104115 134 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm23322-201ENSMUST00000104464 167 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm24067-201ENSMUST00000104514 85 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm11877-201ENSMUST00000118921 852 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm12885-201ENSMUST00000122246 328 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm22514-201ENSMUST00000122547 308 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm11394-201ENSMUST00000181421 517 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm4644-201ENSMUST00000197587 400 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3bQ3ULL6 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Upf3bQ3ULL6 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Upf3bQ3ULL6 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Upf3bQ3ULL6 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.34□□□□□ -1.72
Upf3bQ3ULL6 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms