Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm13876-201ENSMUST00000118451 261 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm13224-201ENSMUST00000119586 94 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm14591-201ENSMUST00000120407 518 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm16276-201ENSMUST00000131218 262 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm22820-201ENSMUST00000157205 329 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm25390-201ENSMUST00000157341 103 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm24965-201ENSMUST00000157922 106 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm23513-201ENSMUST00000158181 133 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm25051-201ENSMUST00000158602 249 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Mir6336-201ENSMUST00000183581 130 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Mir7687-201ENSMUST00000184722 59 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm27421-201ENSMUST00000184729 167 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm7626-201ENSMUST00000195801 353 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 AC154994.1-201ENSMUST00000217395 302 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm2645-201ENSMUST00000223516 547 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Mir30b-201ENSMUST00000083542 96 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm22865-201ENSMUST00000083949 214 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC6.54□□□□□ -1.36
Col9a1Q05722 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col9a1Q05722 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.54□□□□□ -1.36
Col9a1Q05722 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Col9a1Q05722 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm14910-201ENSMUST00000121037 1805 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm13664-201ENSMUST00000117304 345 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm11633-201ENSMUST00000118176 444 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm12677-201ENSMUST00000118668 426 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm7657-201ENSMUST00000118851 666 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Mir1932-201ENSMUST00000157390 90 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm23546-201ENSMUST00000158211 137 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col9a1Q05722 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm17954-201ENSMUST00000195893 607 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm43214-201ENSMUST00000199242 352 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm24045-201ENSMUST00000083113 98 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC6.53□□□□□ -1.36
Col9a1Q05722 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms