Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm44266-201ENSMUST00000205235 500 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.13□□□□□ -1.43
Col6a1Q04857 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 AC124433.2-201ENSMUST00000223867 291 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm24460-201ENSMUST00000082731 106 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Col6a1Q04857 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col6a1Q04857 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col6a1Q04857 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm11352-201ENSMUST00000119264 517 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm11366-201ENSMUST00000119279 429 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm6175-201ENSMUST00000121351 400 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm8338-201ENSMUST00000163928 363 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm28008-201ENSMUST00000184021 186 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm17946-201ENSMUST00000186856 538 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a1Q04857 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm18127-201ENSMUST00000208479 725 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm45409-201ENSMUST00000211486 252 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.12□□□□□ -1.43
Col6a1Q04857 AC124446.1-201ENSMUST00000221027 2644 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.12□□□□□ -1.43
Col6a1Q04857 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a1Q04857 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col6a1Q04857 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm24935-201ENSMUST00000103770 110 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm24117-201ENSMUST00000103973 133 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm24608-201ENSMUST00000104381 136 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm23879-201ENSMUST00000116874 126 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm13672-201ENSMUST00000117554 459 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm12230-201ENSMUST00000118301 454 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms