Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm43469-201ENSMUST00000196084 4634 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm44667-201ENSMUST00000207632 3337 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm11366-201ENSMUST00000119279 429 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm11677-201ENSMUST00000121349 977 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm12488-201ENSMUST00000122449 499 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Snora81-201ENSMUST00000157310 178 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm7609-204ENSMUST00000161424 461 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Trbv10-201ENSMUST00000168322 289 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm20701-201ENSMUST00000176082 347 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm26426-201ENSMUST00000177866 123 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm26060-201ENSMUST00000180094 123 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm28629-201ENSMUST00000187309 263 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm3933-201ENSMUST00000195391 439 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm44794-201ENSMUST00000206550 411 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm45387-201ENSMUST00000209792 632 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm45523-201ENSMUST00000210712 799 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm45246-201ENSMUST00000210820 367 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm45530-201ENSMUST00000211658 225 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.84□□□□□ -1.63
Col8a1Q00780 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm7042-201ENSMUST00000223027 384 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm10794-201ENSMUST00000099624 207 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm43874-201ENSMUST00000204853 2798 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Gm15425-201ENSMUST00000119013 2711 ntBASIC4.84□□□□□ -1.63
Col8a1Q00780 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col8a1Q00780 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col8a1Q00780 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Col8a1Q00780 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col8a1Q00780 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col8a1Q00780 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col8a1Q00780 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Col8a1Q00780 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm44193-201ENSMUST00000204822 2523 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm43503-201ENSMUST00000200033 3408 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm5594-201ENSMUST00000172712 1429 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col8a1Q00780 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col8a1Q00780 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm24578-201ENSMUST00000103970 129 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm15076-201ENSMUST00000117076 474 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm16128-201ENSMUST00000117855 626 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col8a1Q00780 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm23954-201ENSMUST00000157213 353 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm23553-201ENSMUST00000157817 295 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm24359-201ENSMUST00000158418 221 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm44370-201ENSMUST00000175436 112 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm23047-201ENSMUST00000177661 94 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm25944-201ENSMUST00000178758 94 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm21070-201ENSMUST00000182425 985 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms