Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Mir466i-201ENSMUST00000116924 121 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm23226-201ENSMUST00000116927 103 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm11406-201ENSMUST00000117418 484 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm7219-201ENSMUST00000119619 297 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm14473-201ENSMUST00000122269 557 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm24998-201ENSMUST00000157908 89 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm24850-201ENSMUST00000158029 119 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm27190-201ENSMUST00000184890 542 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm8502-201ENSMUST00000185708 901 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm21147-201ENSMUST00000186046 913 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm37241-201ENSMUST00000191736 523 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm42451-201ENSMUST00000197410 244 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm7099-201ENSMUST00000080066 554 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Mir202-201ENSMUST00000083568 72 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.58□□□□□ -1.84
Nkx3-1P97436 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Nkx3-1P97436 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm24544-201ENSMUST00000103862 110 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm23271-201ENSMUST00000104052 124 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm15313-201ENSMUST00000119179 282 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm21990-201ENSMUST00000124692 383 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm23112-201ENSMUST00000158606 125 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm22135-201ENSMUST00000158752 108 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Mir713-201ENSMUST00000178651 108 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm28263-201ENSMUST00000185884 400 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm38061-201ENSMUST00000192490 365 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm43856-201ENSMUST00000197004 369 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm44765-201ENSMUST00000206927 601 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Gm45259-201ENSMUST00000209217 1006 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx3-1P97436 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.57□□□□□ -1.84
Nkx3-1P97436 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Nkx3-1P97436 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm14299-201ENSMUST00000117586 397 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm12379-201ENSMUST00000119607 391 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm14716-201ENSMUST00000120138 718 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm25553-201ENSMUST00000158076 79 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Gm26354-201ENSMUST00000158221 129 ntBASIC3.56□□□□□ -1.84
Nkx3-1P97436 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms