Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Gm8023-201ENSMUST00000195298 903 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Mir142-201ENSMUST00000198092 64 ntBASIC4.13□□□□□ -1.75
Sox3P53784 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm45458-201ENSMUST00000209900 522 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm18487-201ENSMUST00000215826 878 ntBASIC4.13□□□□□ -1.75
Sox3P53784 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox3P53784 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.13□□□□□ -1.75
Sox3P53784 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.13□□□□□ -1.75
Sox3P53784 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.13□□□□□ -1.75
Sox3P53784 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.13□□□□□ -1.75
Sox3P53784 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.13□□□□□ -1.75
Sox3P53784 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm8724-201ENSMUST00000081668 483 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm22005-201ENSMUST00000082795 141 ntBASIC4.13□□□□□ -1.75
Sox3P53784 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.13□□□□□ -1.75
Sox3P53784 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm25007-201ENSMUST00000083808 133 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sox3P53784 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox3P53784 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Sox3P53784 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sox3P53784 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.12□□□□□ -1.75
Sox3P53784 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sox3P53784 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sox3P53784 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm25168-201ENSMUST00000104189 132 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Gm12571-201ENSMUST00000118132 243 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm12458-201ENSMUST00000119387 495 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.12□□□□□ -1.75
Sox3P53784 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.12□□□□□ -1.75
Sox3P53784 Gm22059-201ENSMUST00000157544 104 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Gm27165-201ENSMUST00000183951 232 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Mir6537-201ENSMUST00000184150 110 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.12□□□□□ -1.75
Sox3P53784 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Sox3P53784 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.12□□□□□ -1.75
Sox3P53784 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.12□□□□□ -1.75
Sox3P53784 Gm45474-201ENSMUST00000209471 408 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm39197-201ENSMUST00000212069 457 ntBASIC4.12□□□□□ -1.75
Sox3P53784 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.12□□□□□ -1.75
Sox3P53784 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.12□□□□□ -1.75
Sox3P53784 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sox3P53784 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sox3P53784 Mir202-201ENSMUST00000083568 72 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Sox3P53784 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.12□□□□□ -1.75
Sox3P53784 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox3P53784 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Sox3P53784 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Sox3P53784 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sox3P53784 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sox3P53784 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sox3P53784 Gm23175-201ENSMUST00000104371 132 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Gm12252-201ENSMUST00000119517 219 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Gm14303-201ENSMUST00000121320 171 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Gm11965-201ENSMUST00000122017 277 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.11□□□□□ -1.75
Sox3P53784 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sox3P53784 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.11□□□□□ -1.75
Sox3P53784 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Sox3P53784 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sox3P53784 Gm19280-201ENSMUST00000190191 205 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.11□□□□□ -1.75
Sox3P53784 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sox3P53784 Gm44389-201ENSMUST00000203795 182 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms