Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GdnfP48540 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GdnfP48540 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GdnfP48540 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GdnfP48540 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm15016-201ENSMUST00000117300 720 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm14933-201ENSMUST00000118840 481 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm13991-201ENSMUST00000120190 648 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm12369-201ENSMUST00000121343 942 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm11403-201ENSMUST00000122195 369 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm24289-201ENSMUST00000157629 135 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm6486-201ENSMUST00000166202 434 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm24812-201ENSMUST00000175315 284 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm26557-201ENSMUST00000180756 493 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm8649-201ENSMUST00000181799 233 ntBASIC5.25□□□□□ -1.57
GdnfP48540 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GdnfP48540 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GdnfP48540 Gm29228-201ENSMUST00000185489 418 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm29334-201ENSMUST00000190334 357 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.25□□□□□ -1.57
GdnfP48540 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm18551-201ENSMUST00000195594 642 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm5050-201ENSMUST00000197164 775 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm43415-201ENSMUST00000201934 750 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm45439-201ENSMUST00000211723 359 ntBASIC5.25□□□□□ -1.57
GdnfP48540 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.25□□□□□ -1.57
GdnfP48540 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.25□□□□□ -1.57
GdnfP48540 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.25□□□□□ -1.57
GdnfP48540 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
GdnfP48540 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Gm16261-201ENSMUST00000096813 205 ntBASIC5.25□□□□□ -1.57
GdnfP48540 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.25□□□□□ -1.57
GdnfP48540 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.25□□□□□ -1.57
GdnfP48540 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
GdnfP48540 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.25□□□□□ -1.57
GdnfP48540 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GdnfP48540 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
GdnfP48540 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
GdnfP48540 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
GdnfP48540 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
GdnfP48540 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
GdnfP48540 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
GdnfP48540 Gm25346-201ENSMUST00000104509 128 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
GdnfP48540 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm11221-201ENSMUST00000117230 597 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Gm12677-201ENSMUST00000118668 426 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm13866-201ENSMUST00000118901 968 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm11882-201ENSMUST00000121463 506 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.24□□□□□ -1.57
GdnfP48540 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.24□□□□□ -1.57
GdnfP48540 Gm26162-201ENSMUST00000157793 132 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm25718-201ENSMUST00000158632 118 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm25487-201ENSMUST00000158725 125 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
GdnfP48540 Gm18802-201ENSMUST00000186270 888 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm29519-201ENSMUST00000186994 398 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm43243-201ENSMUST00000199964 278 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.24□□□□□ -1.57
GdnfP48540 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.24□□□□□ -1.57
GdnfP48540 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.24□□□□□ -1.57
GdnfP48540 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.24□□□□□ -1.57
GdnfP48540 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.24□□□□□ -1.57
GdnfP48540 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.24□□□□□ -1.57
GdnfP48540 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms