Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm22600-201ENSMUST00000157598 269 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm25913-201ENSMUST00000157617 135 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm23501-201ENSMUST00000157744 256 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm26352-201ENSMUST00000158223 125 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm22158-201ENSMUST00000158411 126 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm3030-201ENSMUST00000163410 516 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm3339-201ENSMUST00000163462 475 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm6245-201ENSMUST00000164699 768 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rfx3P48381 Gm21960-201ENSMUST00000181924 452 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm27564-201ENSMUST00000185196 96 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rfx3P48381 Gm3496-201ENSMUST00000188283 745 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm29196-201ENSMUST00000189239 618 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm37934-201ENSMUST00000192902 402 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm28724-202ENSMUST00000194218 295 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm37836-201ENSMUST00000195875 175 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm8774-201ENSMUST00000203621 692 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.81□□□□□ -1.8
Rfx3P48381 Gm44869-201ENSMUST00000208836 357 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rfx3P48381 Gm45710-201ENSMUST00000212847 215 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.81□□□□□ -1.8
Rfx3P48381 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.81□□□□□ -1.8
Rfx3P48381 Gm19786-201ENSMUST00000222589 580 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Rfx3P48381 Gm23407-201ENSMUST00000082538 91 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Gm10794-201ENSMUST00000099624 207 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rfx3P48381 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rfx3P48381 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.81□□□□□ -1.8
Rfx3P48381 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Rfx3P48381 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rfx3P48381 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rfx3P48381 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm24067-201ENSMUST00000104514 85 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm11878-201ENSMUST00000117908 400 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm13550-201ENSMUST00000118185 525 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm5060-201ENSMUST00000120072 599 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm14229-201ENSMUST00000121178 850 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm15141-201ENSMUST00000121860 729 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm24444-201ENSMUST00000157244 308 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Zakit-201ENSMUST00000157677 308 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Mir7074-201ENSMUST00000183884 63 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm45228-201ENSMUST00000206585 352 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm33626-201ENSMUST00000206790 828 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm44765-201ENSMUST00000206927 601 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm45317-201ENSMUST00000210385 223 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.8□□□□□ -1.8
Rfx3P48381 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Mecom-201ENSMUST00000061088 348 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rfx3P48381 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.8□□□□□ -1.8
Rfx3P48381 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Rfx3P48381 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rfx3P48381 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.8□□□□□ -1.8
Rfx3P48381 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.79□□□□□ -1.8
Rfx3P48381 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Rfx3P48381 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Rfx3P48381 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC3.79□□□□□ -1.8
Rfx3P48381 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.79□□□□□ -1.8
Rfx3P48381 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rfx3P48381 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Rfx3P48381 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Rfx3P48381 Snord66-201ENSMUST00000104051 75 ntBASIC3.79□□□□□ -1.8
Rfx3P48381 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms