Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Col18a1P39061 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col18a1P39061 Gm15110-201ENSMUST00000117545 881 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Gm14766-201ENSMUST00000121689 367 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col18a1P39061 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col18a1P39061 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col18a1P39061 Mir6537-201ENSMUST00000184150 110 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Gm29950-201ENSMUST00000195273 237 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Mir6375-201ENSMUST00000197176 95 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Gm43710-201ENSMUST00000199583 452 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Gm44623-201ENSMUST00000207934 434 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col18a1P39061 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Gm45392-201ENSMUST00000210441 214 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 AC124489.2-201ENSMUST00000223930 589 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 Gm9845-201ENSMUST00000056409 598 ntBASIC6.34□□□□□ -1.39
Col18a1P39061 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col18a1P39061 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col18a1P39061 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col18a1P39061 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col18a1P39061 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Col18a1P39061 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Col18a1P39061 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col18a1P39061 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col18a1P39061 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col18a1P39061 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col18a1P39061 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col18a1P39061 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col18a1P39061 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col18a1P39061 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Col18a1P39061 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.34□□□□□ -1.4
Col18a1P39061 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col18a1P39061 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col18a1P39061 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col18a1P39061 Gm12386-201ENSMUST00000117380 688 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Gm12045-201ENSMUST00000122122 573 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Gm23554-201ENSMUST00000157818 110 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Gm26490-201ENSMUST00000157879 140 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Igkv17-134-201ENSMUST00000168310 348 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Gm18177-201ENSMUST00000188373 404 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Gm37492-201ENSMUST00000191948 376 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Gm37288-201ENSMUST00000193963 334 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Gm29848-201ENSMUST00000203107 295 ntBASIC6.34□□□□□ -1.4
Col18a1P39061 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Col18a1P39061 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col18a1P39061 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
Col18a1P39061 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Col18a1P39061 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Col18a1P39061 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm36927-201ENSMUST00000192504 1841 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Col18a1P39061 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm19666-201ENSMUST00000198176 1893 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Col18a1P39061 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Col18a1P39061 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col18a1P39061 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm23709-201ENSMUST00000104364 130 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm12039-201ENSMUST00000118219 180 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm4725-201ENSMUST00000151048 587 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Col18a1P39061 Gm17038-201ENSMUST00000166586 494 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Gm28579-201ENSMUST00000186143 369 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Gm42579-201ENSMUST00000200512 734 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 AC154677.1-201ENSMUST00000227636 2805 ntBASIC6.33□□□□□ -1.4
Col18a1P39061 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Col18a1P39061 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col18a1P39061 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col18a1P39061 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms