Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Usp4P35123 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.51□□□□□ -1.53
Usp4P35123 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm25758-201ENSMUST00000103987 129 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Lipe-203ENSMUST00000105177 1251 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.51□□□□□ -1.53
Usp4P35123 Gm13454-201ENSMUST00000118166 483 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm11894-201ENSMUST00000121579 328 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Gm14651-201ENSMUST00000147192 442 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm23501-201ENSMUST00000157744 256 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm22841-201ENSMUST00000158443 62 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm25348-201ENSMUST00000158961 111 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm17142-201ENSMUST00000164933 645 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm20397-201ENSMUST00000174520 362 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm6113-201ENSMUST00000180319 639 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm27355-201ENSMUST00000185045 128 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Gm18291-201ENSMUST00000190791 301 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm38041-201ENSMUST00000194445 661 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm29813-201ENSMUST00000195856 447 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm8458-201ENSMUST00000196658 819 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm43712-201ENSMUST00000198020 291 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm43554-201ENSMUST00000199987 186 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm33626-201ENSMUST00000206790 828 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Gm45316-201ENSMUST00000210128 162 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Gm17999-201ENSMUST00000211568 542 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Usp4P35123 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.51□□□□□ -1.53
Usp4P35123 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Usp4P35123 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Usp4P35123 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Usp4P35123 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Usp4P35123 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Usp4P35123 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp4P35123 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.51□□□□□ -1.53
Usp4P35123 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Usp4P35123 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp4P35123 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp4P35123 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Usp4P35123 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Usp4P35123 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.5□□□□□ -1.53
Usp4P35123 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Usp4P35123 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp4P35123 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Usp4P35123 Gm23750-201ENSMUST00000104222 132 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm25876-201ENSMUST00000104329 119 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm13733-201ENSMUST00000117290 535 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm14534-201ENSMUST00000120045 357 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Usp4P35123 Gm15044-201ENSMUST00000120703 598 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.5□□□□□ -1.53
Usp4P35123 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.5□□□□□ -1.53
Usp4P35123 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.5□□□□□ -1.53
Usp4P35123 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Usp4P35123 Gm24940-201ENSMUST00000158326 108 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.5□□□□□ -1.53
Usp4P35123 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Usp4P35123 Gm22646-201ENSMUST00000175130 115 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm27976-201ENSMUST00000183635 162 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Mir6539-201ENSMUST00000183732 110 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm18296-201ENSMUST00000192475 783 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.5□□□□□ -1.53
Usp4P35123 Gm18036-201ENSMUST00000195256 272 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.5□□□□□ -1.53
Usp4P35123 Gm45673-201ENSMUST00000210293 358 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms