Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm22472-201ENSMUST00000104115 134 ntBASIC3.8□□□□□ -1.8
P20040 Gm13733-201ENSMUST00000117290 535 ntBASIC3.8□□□□□ -1.8
P20040 Gm13785-201ENSMUST00000119099 690 ntBASIC3.8□□□□□ -1.8
P20040 Gm13460-201ENSMUST00000121274 353 ntBASIC3.8□□□□□ -1.8
P20040 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.8□□□□□ -1.8
P20040 Gm7846-201ENSMUST00000145844 274 ntBASIC3.8□□□□□ -1.8
P20040 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.8□□□□□ -1.8
P20040 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.8□□□□□ -1.8
P20040 Gm25456-201ENSMUST00000157952 109 ntBASIC3.8□□□□□ -1.8
P20040 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.8□□□□□ -1.8
P20040 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
P20040 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
P20040 Gm27286-201ENSMUST00000184934 179 ntBASIC3.8□□□□□ -1.8
P20040 Gm28924-201ENSMUST00000190012 241 ntBASIC3.8□□□□□ -1.8
P20040 Gm9238-201ENSMUST00000196181 329 ntBASIC3.8□□□□□ -1.8
P20040 Gm42539-201ENSMUST00000197009 308 ntBASIC3.8□□□□□ -1.8
P20040 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
P20040 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.8□□□□□ -1.8
P20040 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.8□□□□□ -1.8
P20040 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
P20040 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.8□□□□□ -1.8
P20040 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.8□□□□□ -1.8
P20040 Gm5649-201ENSMUST00000217918 951 ntBASIC3.8□□□□□ -1.8
P20040 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.8□□□□□ -1.8
P20040 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
P20040 Gm10115-201ENSMUST00000076071 1228 ntBASIC3.8□□□□□ -1.8
P20040 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
P20040 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
P20040 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
P20040 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.8□□□□□ -1.8
P20040 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.8□□□□□ -1.8
P20040 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.8□□□□□ -1.8
P20040 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
P20040 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
P20040 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.8□□□□□ -1.8
P20040 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
P20040 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.79□□□□□ -1.8
P20040 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.79□□□□□ -1.8
P20040 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.79□□□□□ -1.8
P20040 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.79□□□□□ -1.8
P20040 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.79□□□□□ -1.8
P20040 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.79□□□□□ -1.8
P20040 Gm17153-201ENSMUST00000171314 490 ntBASIC3.79□□□□□ -1.8
P20040 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.79□□□□□ -1.8
P20040 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.79□□□□□ -1.8
P20040 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.79□□□□□ -1.8
P20040 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.79□□□□□ -1.8
P20040 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.79□□□□□ -1.8
P20040 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.79□□□□□ -1.8
P20040 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.79□□□□□ -1.8
P20040 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.79□□□□□ -1.8
P20040 Gm45367-201ENSMUST00000210171 347 ntBASIC3.79□□□□□ -1.8
P20040 Gm45247-201ENSMUST00000210757 309 ntBASIC3.79□□□□□ -1.8
P20040 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.79□□□□□ -1.8
P20040 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.79□□□□□ -1.8
P20040 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.79□□□□□ -1.8
P20040 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
P20040 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
P20040 Gm23464-201ENSMUST00000083145 147 ntBASIC3.79□□□□□ -1.8
P20040 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
P20040 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
P20040 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
P20040 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.79□□□□□ -1.8
P20040 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
P20040 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
P20040 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
P20040 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
P20040 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
P20040 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 AC124446.1-201ENSMUST00000221027 2644 ntBASIC3.78□□□□□ -1.8
P20040 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.78□□□□□ -1.8
P20040 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
P20040 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 Gm15426-201ENSMUST00000117823 556 ntBASIC3.78□□□□□ -1.8
P20040 Gm11878-201ENSMUST00000117908 400 ntBASIC3.78□□□□□ -1.8
P20040 Gm11719-201ENSMUST00000119399 351 ntBASIC3.78□□□□□ -1.8
P20040 Gm4852-201ENSMUST00000121202 729 ntBASIC3.78□□□□□ -1.8
P20040 Gm14623-201ENSMUST00000121398 603 ntBASIC3.78□□□□□ -1.8
P20040 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.78□□□□□ -1.8
P20040 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.78□□□□□ -1.8
P20040 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.78□□□□□ -1.8
P20040 Gm23171-201ENSMUST00000157159 264 ntBASIC3.78□□□□□ -1.8
P20040 Gm25264-201ENSMUST00000158519 117 ntBASIC3.78□□□□□ -1.8
P20040 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms