Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sdc1P18828 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sdc1P18828 Gm12719-201ENSMUST00000118859 241 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm7421-201ENSMUST00000119298 639 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm7365-201ENSMUST00000120877 639 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Klra13-ps-201ENSMUST00000125813 802 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Gm24719-201ENSMUST00000157520 110 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm26000-201ENSMUST00000157991 107 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm24854-201ENSMUST00000158025 98 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm6486-201ENSMUST00000166202 434 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm3307-201ENSMUST00000176164 632 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm27165-201ENSMUST00000183951 232 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 Gm29105-201ENSMUST00000187256 450 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm18900-201ENSMUST00000193218 584 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm44474-201ENSMUST00000196525 127 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm43408-201ENSMUST00000198263 440 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm44571-201ENSMUST00000208092 533 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gm45690-201ENSMUST00000210775 246 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sdc1P18828 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 AC133910.1-201ENSMUST00000228128 624 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Sdc1P18828 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Snora44-201ENSMUST00000082670 129 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Sdc1P18828 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Sdc1P18828 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Sdc1P18828 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.47□□□□□ -1.85
Sdc1P18828 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sdc1P18828 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
Sdc1P18828 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Sdc1P18828 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.46□□□□□ -1.85
Sdc1P18828 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Sdc1P18828 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Sdc1P18828 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Sdc1P18828 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Sdc1P18828 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm26019-201ENSMUST00000104407 119 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm22953-201ENSMUST00000116724 101 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm13868-201ENSMUST00000122411 294 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm4660-201ENSMUST00000131499 403 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Mir1970-201ENSMUST00000157839 104 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm7152-201ENSMUST00000163570 605 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Sdc1P18828 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm27024-201ENSMUST00000182561 755 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Sdc1P18828 Mir7072-201ENSMUST00000184542 60 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm29492-201ENSMUST00000187124 457 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm36964-201ENSMUST00000191876 198 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm38131-201ENSMUST00000192449 430 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm17967-201ENSMUST00000195319 647 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm44849-201ENSMUST00000207595 484 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 Gm5358-201ENSMUST00000212814 353 ntBASIC3.46□□□□□ -1.86
Sdc1P18828 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC3.46□□□□□ -1.86
Sdc1P18828 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Sdc1P18828 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Sdc1P18828 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Sdc1P18828 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Sdc1P18828 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Sdc1P18828 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.46□□□□□ -1.86
Sdc1P18828 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Sdc1P18828 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Sdc1P18828 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Sdc1P18828 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms