Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.11□□□□□ -1.43
RaraP11416 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.11□□□□□ -1.43
RaraP11416 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.11□□□□□ -1.43
RaraP11416 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RaraP11416 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.11□□□□□ -1.43
RaraP11416 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RaraP11416 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 Gm23311-201ENSMUST00000104152 134 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm13835-201ENSMUST00000118459 685 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm11774-201ENSMUST00000118601 293 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm14933-201ENSMUST00000118840 481 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm13804-201ENSMUST00000119552 172 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm12340-201ENSMUST00000121617 462 ntBASIC6.11□□□□□ -1.43
RaraP11416 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 Gm24733-201ENSMUST00000158863 253 ntBASIC6.11□□□□□ -1.43
RaraP11416 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm23872-201ENSMUST00000175432 77 ntBASIC6.11□□□□□ -1.43
RaraP11416 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
RaraP11416 Gm7745-201ENSMUST00000182235 973 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm9569-201ENSMUST00000187492 787 ntBASIC6.11□□□□□ -1.43
RaraP11416 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 Gm37430-201ENSMUST00000193039 196 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm3351-201ENSMUST00000193454 505 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm17781-201ENSMUST00000195232 649 ntBASIC6.11□□□□□ -1.43
RaraP11416 Nras-ps2-201ENSMUST00000195269 178 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm44312-201ENSMUST00000203536 469 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm44768-201ENSMUST00000205719 393 ntBASIC6.11□□□□□ -1.43
RaraP11416 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm44852-201ENSMUST00000207950 369 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm7380-201ENSMUST00000211599 466 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm18696-201ENSMUST00000220103 274 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm3800-201ENSMUST00000221086 554 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm17915-201ENSMUST00000222077 548 ntBASIC6.11□□□□□ -1.43
RaraP11416 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.11□□□□□ -1.43
RaraP11416 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RaraP11416 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RaraP11416 Gm25793-201ENSMUST00000083287 107 ntBASIC6.11□□□□□ -1.43
RaraP11416 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.11□□□□□ -1.43
RaraP11416 Gm10540-201ENSMUST00000097581 276 ntBASIC6.11□□□□□ -1.43
RaraP11416 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RaraP11416 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RaraP11416 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.11□□□□□ -1.43
RaraP11416 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
RaraP11416 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
RaraP11416 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RaraP11416 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RaraP11416 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.11□□□□□ -1.43
RaraP11416 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.1□□□□□ -1.43
RaraP11416 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RaraP11416 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.1□□□□□ -1.43
RaraP11416 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RaraP11416 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.1□□□□□ -1.43
RaraP11416 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RaraP11416 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.1□□□□□ -1.43
RaraP11416 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm23691-201ENSMUST00000101878 107 ntBASIC6.1□□□□□ -1.43
RaraP11416 Mir700-201ENSMUST00000102169 79 ntBASIC6.1□□□□□ -1.43
RaraP11416 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RaraP11416 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm11262-201ENSMUST00000119326 833 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm7079-201ENSMUST00000119726 171 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm14655-201ENSMUST00000120124 578 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm11369-201ENSMUST00000120812 318 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm15335-201ENSMUST00000122442 411 ntBASIC6.1□□□□□ -1.43
RaraP11416 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm22867-201ENSMUST00000157499 109 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm25706-201ENSMUST00000157828 247 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm26352-201ENSMUST00000158223 125 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm23473-201ENSMUST00000158883 116 ntBASIC6.1□□□□□ -1.43
RaraP11416 Ear-ps12-201ENSMUST00000161720 451 ntBASIC6.1□□□□□ -1.43
RaraP11416 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.1□□□□□ -1.43
RaraP11416 Gm6872-201ENSMUST00000165001 700 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RaraP11416 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RaraP11416 Gm28629-201ENSMUST00000187309 263 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.1□□□□□ -1.43
RaraP11416 Gm37177-201ENSMUST00000193768 417 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm8747-201ENSMUST00000195392 751 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm44002-201ENSMUST00000205134 594 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Gm18194-201ENSMUST00000210455 481 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms