Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC3.33□□□□□ -1.88
CfdP03953 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CfdP03953 Gm25264-201ENSMUST00000158519 117 ntBASIC3.33□□□□□ -1.88
CfdP03953 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.33□□□□□ -1.88
CfdP03953 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CfdP03953 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CfdP03953 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CfdP03953 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CfdP03953 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.33□□□□□ -1.88
CfdP03953 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CfdP03953 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.33□□□□□ -1.88
CfdP03953 Gm20954-201ENSMUST00000189078 644 ntBASIC3.33□□□□□ -1.88
CfdP03953 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.33□□□□□ -1.88
CfdP03953 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CfdP03953 Gm44887-201ENSMUST00000208980 178 ntBASIC3.33□□□□□ -1.88
CfdP03953 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CfdP03953 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CfdP03953 Gm8264-201ENSMUST00000217801 465 ntBASIC3.33□□□□□ -1.88
CfdP03953 Gm8158-201ENSMUST00000219220 465 ntBASIC3.33□□□□□ -1.88
CfdP03953 Gm8112-201ENSMUST00000219637 465 ntBASIC3.33□□□□□ -1.88
CfdP03953 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CfdP03953 Gm19134-201ENSMUST00000221203 487 ntBASIC3.33□□□□□ -1.88
CfdP03953 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.33□□□□□ -1.88
CfdP03953 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.33□□□□□ -1.88
CfdP03953 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CfdP03953 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CfdP03953 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CfdP03953 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CfdP03953 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
CfdP03953 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CfdP03953 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CfdP03953 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.33□□□□□ -1.88
CfdP03953 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CfdP03953 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CfdP03953 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CfdP03953 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CfdP03953 AC112142.1-203ENSMUST00000228670 2472 ntBASIC3.32□□□□□ -1.88
CfdP03953 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CfdP03953 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.32□□□□□ -1.88
CfdP03953 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.32□□□□□ -1.88
CfdP03953 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm11923-201ENSMUST00000118135 508 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm13501-201ENSMUST00000118477 979 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm13677-201ENSMUST00000120739 595 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm13743-201ENSMUST00000121486 724 ntBASIC3.32□□□□□ -1.88
CfdP03953 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm23743-201ENSMUST00000157389 274 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm24014-201ENSMUST00000157728 157 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm23225-201ENSMUST00000158121 114 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm23702-201ENSMUST00000158840 130 ntBASIC3.32□□□□□ -1.88
CfdP03953 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CfdP03953 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CfdP03953 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CfdP03953 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CfdP03953 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CfdP03953 Gm5974-201ENSMUST00000181607 986 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm27387-201ENSMUST00000184583 116 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm28654-201ENSMUST00000189801 379 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.32□□□□□ -1.88
CfdP03953 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.32□□□□□ -1.88
CfdP03953 Gm2142-201ENSMUST00000197899 589 ntBASIC3.32□□□□□ -1.88
CfdP03953 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CfdP03953 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.32□□□□□ -1.88
CfdP03953 Gm29785-201ENSMUST00000217033 383 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm5917-201ENSMUST00000217638 721 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.32□□□□□ -1.88
CfdP03953 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.32□□□□□ -1.88
CfdP03953 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC3.32□□□□□ -1.88
CfdP03953 Gm36501-201ENSMUST00000221857 745 ntBASIC3.32□□□□□ -1.88
CfdP03953 AC154851.2-201ENSMUST00000222172 644 ntBASIC3.32□□□□□ -1.88
CfdP03953 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.32□□□□□ -1.88
CfdP03953 AC154562.1-201ENSMUST00000226140 966 ntBASIC3.32□□□□□ -1.88
CfdP03953 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
CfdP03953 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CfdP03953 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CfdP03953 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CfdP03953 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CfdP03953 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CfdP03953 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CfdP03953 Gm24950-201ENSMUST00000082768 191 ntBASIC3.32□□□□□ -1.88
CfdP03953 Snora70-201ENSMUST00000083047 137 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm23971-201ENSMUST00000083317 191 ntBASIC3.32□□□□□ -1.88
CfdP03953 Mir188-201ENSMUST00000083464 68 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm23849-201ENSMUST00000083833 191 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm26316-201ENSMUST00000083886 191 ntBASIC3.32□□□□□ -1.88
CfdP03953 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.32□□□□□ -1.88
CfdP03953 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CfdP03953 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.32□□□□□ -1.88
CfdP03953 Gm17101-201ENSMUST00000169520 1588 ntBASIC3.32□□□□□ -1.88
CfdP03953 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CfdP03953 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.32□□□□□ -1.88
CfdP03953 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CfdP03953 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CfdP03953 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.31□□□□□ -1.88
CfdP03953 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CfdP03953 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
CfdP03953 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
CfdP03953 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.31□□□□□ -1.88
CfdP03953 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CfdP03953 Gm15194-201ENSMUST00000120453 434 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms