Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm6446-201ENSMUST00000120604 818 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm15300-201ENSMUST00000122324 279 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm25291-201ENSMUST00000122795 144 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm26346-201ENSMUST00000157525 329 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm22420-201ENSMUST00000178795 126 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm2092-201ENSMUST00000178887 639 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm2759-201ENSMUST00000179938 639 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm27148-201ENSMUST00000185086 160 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm28579-201ENSMUST00000186143 369 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm38234-201ENSMUST00000195204 421 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm43717-201ENSMUST00000198684 310 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm44002-201ENSMUST00000205134 594 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm45700-201ENSMUST00000205866 347 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm45727-201ENSMUST00000212886 572 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm36501-201ENSMUST00000221857 745 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm25699-201ENSMUST00000082896 167 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm24446-201ENSMUST00000083982 156 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm14605-201ENSMUST00000120599 268 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm9225-201ENSMUST00000121921 836 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm26255-201ENSMUST00000122492 103 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm7846-201ENSMUST00000145844 274 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm25387-201ENSMUST00000157813 132 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm8338-201ENSMUST00000163928 363 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm25065-201ENSMUST00000177914 132 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm23003-201ENSMUST00000179948 107 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm25891-201ENSMUST00000180050 132 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm23648-201ENSMUST00000180301 107 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Mir7082-201ENSMUST00000183526 92 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm5116-201ENSMUST00000187732 463 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm29627-201ENSMUST00000187984 463 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Mir6516-201ENSMUST00000196236 110 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm19140-201ENSMUST00000209790 421 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm21112-201ENSMUST00000212224 578 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm7760-201ENSMUST00000212265 578 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm7807-201ENSMUST00000212475 578 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms