Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm13581-201ENSMUST00000120675 278 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm10059-201ENSMUST00000131139 171 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm43185-201ENSMUST00000197507 2775 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm23530-201ENSMUST00000104564 137 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm11576-201ENSMUST00000117433 417 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm6058-201ENSMUST00000154261 399 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm45513-201ENSMUST00000210228 376 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 AC154576.1-201ENSMUST00000225864 563 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a3E9PWQ3 Gm18954-201ENSMUST00000222200 1792 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm11830-201ENSMUST00000120175 561 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm24936-201ENSMUST00000122598 247 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm18352-201ENSMUST00000189113 902 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm44751-201ENSMUST00000208302 4387 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm38043-201ENSMUST00000195501 5141 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a3E9PWQ3 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm26556-201ENSMUST00000180645 320 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm7381-201ENSMUST00000098958 300 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Fus-202ENSMUST00000079045 2623 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 AC153729.4-201ENSMUST00000217582 3826 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm26373-201ENSMUST00000157833 103 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm23963-201ENSMUST00000179603 77 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm37614-201ENSMUST00000195645 210 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm44490-201ENSMUST00000198566 127 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a3E9PWQ3 AC122317.3-201ENSMUST00000219320 3524 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm11719-201ENSMUST00000119399 351 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a3E9PWQ3 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms