Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm42999-201ENSMUST00000198049 786 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm20177-201ENSMUST00000203705 334 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm33626-201ENSMUST00000206790 828 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm45317-201ENSMUST00000210385 223 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm45392-201ENSMUST00000210441 214 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm17779-201ENSMUST00000213395 394 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Synpr-207ENSMUST00000223583 3362 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm26143-201ENSMUST00000104480 108 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm37878-201ENSMUST00000192108 387 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm19080-201ENSMUST00000196082 550 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm43491-201ENSMUST00000197133 784 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm43295-201ENSMUST00000201439 412 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm45032-201ENSMUST00000205375 520 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm44548-201ENSMUST00000208929 192 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim3Q9R1R2 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm14714-201ENSMUST00000119743 439 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm14122-201ENSMUST00000122076 973 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm6245-201ENSMUST00000164699 768 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm3077-201ENSMUST00000165903 627 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm8221-201ENSMUST00000178052 564 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm20203-201ENSMUST00000192352 332 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm37629-201ENSMUST00000193635 1050 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Trbv11-201ENSMUST00000194354 260 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm37601-201ENSMUST00000194922 394 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm37836-201ENSMUST00000195875 175 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm9238-201ENSMUST00000196181 329 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm19908-201ENSMUST00000204684 391 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm45474-201ENSMUST00000209471 408 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm25147-201ENSMUST00000083030 105 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim3Q9R1R2 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.1□□□□□ -1.75
Trim3Q9R1R2 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.1□□□□□ -1.75
Trim3Q9R1R2 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim3Q9R1R2 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim3Q9R1R2 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms