Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm11262-201ENSMUST00000119326 833 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm9428-201ENSMUST00000127214 769 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm16331-201ENSMUST00000144274 498 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Mir1963-201ENSMUST00000158594 59 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Mir3572-201ENSMUST00000175549 86 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm29525-201ENSMUST00000189844 699 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm34176-201ENSMUST00000192621 474 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm42999-201ENSMUST00000198049 786 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm43651-201ENSMUST00000199796 439 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm2522-201ENSMUST00000204280 322 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm38574-201ENSMUST00000211855 640 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm45734-201ENSMUST00000211916 411 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm45874-201ENSMUST00000212423 346 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm7822-201ENSMUST00000222433 581 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm7768-201ENSMUST00000222988 597 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 AL589696.1-201ENSMUST00000225711 330 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm25140-201ENSMUST00000083254 140 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm23459-201ENSMUST00000083259 131 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Gm44668-201ENSMUST00000207911 3265 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trem1Q9JKE2 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.92□□□□□ -1.78
Trem1Q9JKE2 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm24544-201ENSMUST00000103862 110 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm23750-201ENSMUST00000104222 132 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm14772-201ENSMUST00000116562 514 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm12062-201ENSMUST00000117533 259 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm8595-201ENSMUST00000118250 630 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm13435-201ENSMUST00000120111 1023 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm14776-201ENSMUST00000121029 887 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm24739-201ENSMUST00000158855 292 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm23152-201ENSMUST00000175322 116 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Mir7220-201ENSMUST00000183978 60 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm29105-201ENSMUST00000187256 450 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm8241-201ENSMUST00000189286 816 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm37193-201ENSMUST00000193087 513 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm37431-201ENSMUST00000195102 111 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Igkv3-8-201ENSMUST00000197635 339 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm43054-201ENSMUST00000199495 884 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm43424-201ENSMUST00000200484 253 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm9560-201ENSMUST00000205012 1201 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm17989-201ENSMUST00000211543 412 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm29774-201ENSMUST00000219270 436 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm9202-201ENSMUST00000223036 437 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm9512-201ENSMUST00000223112 497 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 AC123665.6-201ENSMUST00000228568 538 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm25682-201ENSMUST00000083942 164 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms