Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm25123-201ENSMUST00000179154 121 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm25353-201ENSMUST00000179366 121 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm22992-201ENSMUST00000179496 121 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm25892-201ENSMUST00000179867 121 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm24092-201ENSMUST00000180257 121 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Mir7685-201ENSMUST00000183555 62 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm37511-201ENSMUST00000192901 294 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 AC124450.1-201ENSMUST00000225569 495 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm24042-201ENSMUST00000083114 103 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm24695-201ENSMUST00000083877 83 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Trim39Q9ESN2 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm22710-201ENSMUST00000116892 125 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm13156-201ENSMUST00000118348 321 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm15840-201ENSMUST00000122099 943 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm23894-201ENSMUST00000158107 313 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm25433-201ENSMUST00000158283 286 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm24499-201ENSMUST00000158446 104 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm22548-201ENSMUST00000174899 78 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm22701-201ENSMUST00000175371 291 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm23191-201ENSMUST00000179147 107 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Mir6382-201ENSMUST00000184055 110 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm27385-201ENSMUST00000184747 104 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm28283-201ENSMUST00000185509 178 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm38030-201ENSMUST00000192376 475 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm6631-201ENSMUST00000193699 559 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm19202-201ENSMUST00000198096 808 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm42828-201ENSMUST00000199669 469 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm44858-201ENSMUST00000207360 154 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm2996-201ENSMUST00000211398 537 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm25126-201ENSMUST00000083343 102 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim39Q9ESN2 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms