Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm22350-201ENSMUST00000083924 156 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Snord65-201ENSMUST00000104269 72 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm23226-201ENSMUST00000116927 103 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm11698-201ENSMUST00000117948 455 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm15421-202ENSMUST00000118224 399 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm14750-201ENSMUST00000118262 516 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm13478-201ENSMUST00000118312 413 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm13532-201ENSMUST00000120373 240 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm13092-201ENSMUST00000136346 260 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm11281-201ENSMUST00000141391 576 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm22158-201ENSMUST00000158411 126 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm2389-201ENSMUST00000160487 189 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm28385-201ENSMUST00000185671 292 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm29588-201ENSMUST00000185738 298 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm37878-201ENSMUST00000192108 387 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm38008-201ENSMUST00000195333 518 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm19181-201ENSMUST00000218891 940 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm6863-201ENSMUST00000052882 636 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm24919-201ENSMUST00000083020 106 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Lima1Q9ERG0 Gm43374-201ENSMUST00000202498 2391 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm37718-201ENSMUST00000191655 2631 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm15933-201ENSMUST00000117215 616 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm24444-201ENSMUST00000157244 308 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm23231-201ENSMUST00000157299 104 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm26312-201ENSMUST00000157769 165 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm3084-201ENSMUST00000169967 598 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm29320-201ENSMUST00000185235 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm28471-201ENSMUST00000185994 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm29179-202ENSMUST00000186138 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm28598-201ENSMUST00000186490 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm29448-201ENSMUST00000186675 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm29314-201ENSMUST00000186800 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm28253-202ENSMUST00000187971 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm29268-201ENSMUST00000188669 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm29169-201ENSMUST00000189835 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm29218-205ENSMUST00000190846 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm28978-201ENSMUST00000191120 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm37172-201ENSMUST00000191926 615 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm37836-201ENSMUST00000195875 175 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm4410-201ENSMUST00000199349 686 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4□□□□□ -1.77
Lima1Q9ERG0 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm44952-201ENSMUST00000204443 433 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm18320-201ENSMUST00000211304 595 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4□□□□□ -1.77
Lima1Q9ERG0 AC138401.2-201ENSMUST00000220461 365 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 AL672194.1-201ENSMUST00000224841 603 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lima1Q9ERG0 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms