Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm43440-201ENSMUST00000201957 729 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm44449-201ENSMUST00000203610 153 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm18468-201ENSMUST00000207321 369 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm18470-201ENSMUST00000207467 420 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm18465-201ENSMUST00000207468 369 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm18464-201ENSMUST00000207803 420 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm18458-201ENSMUST00000207908 369 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm18461-201ENSMUST00000208421 420 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 AC141642.1-201ENSMUST00000220598 229 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 AC167192.4-201ENSMUST00000224087 993 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm24921-201ENSMUST00000083024 107 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm43320-201ENSMUST00000196047 2916 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm24230-201ENSMUST00000104313 129 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm15073-201ENSMUST00000117432 634 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm7429-201ENSMUST00000118664 348 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm25806-201ENSMUST00000122782 122 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm25865-201ENSMUST00000158247 104 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm29159-201ENSMUST00000187969 379 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm28113-201ENSMUST00000188280 229 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm19224-201ENSMUST00000190477 793 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm18602-201ENSMUST00000209794 851 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Gm3912-203ENSMUST00000211024 367 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ddx56Q9D0R4 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Ddx56Q9D0R4 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Ddx56Q9D0R4 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ddx56Q9D0R4 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ddx56Q9D0R4 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm22468-201ENSMUST00000116680 120 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm26248-201ENSMUST00000116700 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm26137-201ENSMUST00000116701 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm26190-201ENSMUST00000116704 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm24617-201ENSMUST00000116705 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm25778-201ENSMUST00000116713 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm25774-201ENSMUST00000116717 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm22102-201ENSMUST00000116730 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm23177-201ENSMUST00000116784 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm24193-201ENSMUST00000116801 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm24744-201ENSMUST00000116833 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm24427-201ENSMUST00000116896 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm22346-201ENSMUST00000116918 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm23606-201ENSMUST00000116938 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm22029-201ENSMUST00000116940 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm26298-201ENSMUST00000116956 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm23844-201ENSMUST00000116959 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm24484-201ENSMUST00000117009 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm25347-201ENSMUST00000117026 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm22112-201ENSMUST00000117032 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm14926-201ENSMUST00000120650 508 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms