Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14428-201ENSMUST00000120408 822 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm13368-201ENSMUST00000122443 430 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm38075-201ENSMUST00000191979 920 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm43804-201ENSMUST00000198280 456 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm43794-201ENSMUST00000200971 692 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm18482-201ENSMUST00000202405 760 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm3148-201ENSMUST00000203594 612 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 AC152415.1-201ENSMUST00000213320 440 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 AC159621.1-201ENSMUST00000223249 163 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 AC091783.4-201ENSMUST00000224940 611 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm7984-201ENSMUST00000060640 538 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm22229-201ENSMUST00000082987 108 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm14558-201ENSMUST00000117458 381 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm14175-201ENSMUST00000119835 241 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm15034-201ENSMUST00000120043 349 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm12578-201ENSMUST00000121244 417 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm4912-201ENSMUST00000122212 1044 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm4832-201ENSMUST00000182679 399 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm9569-201ENSMUST00000187492 787 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm43237-201ENSMUST00000196835 1044 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm43078-201ENSMUST00000197222 168 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm18850-201ENSMUST00000211578 388 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 AC099578.1-201ENSMUST00000220147 435 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm7753-201ENSMUST00000221007 867 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gm42729-201ENSMUST00000201770 2930 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 AC125532.1-201ENSMUST00000216210 2334 ntBASIC6.16□□□□□ -1.42
Clp1Q99LI9 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Clp1Q99LI9 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.16□□□□□ -1.42
Clp1Q99LI9 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Clp1Q99LI9 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clp1Q99LI9 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clp1Q99LI9 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Clp1Q99LI9 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.15□□□□□ -1.42
Clp1Q99LI9 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Clp1Q99LI9 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Clp1Q99LI9 AC187103.2-201ENSMUST00000223605 1617 ntBASIC6.15□□□□□ -1.42
Clp1Q99LI9 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms