Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm23925-202ENSMUST00000188429 132 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm29634-201ENSMUST00000188467 696 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm28699-201ENSMUST00000189193 696 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm8132-201ENSMUST00000204938 640 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm45032-201ENSMUST00000205375 520 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm44703-201ENSMUST00000205724 248 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm33626-201ENSMUST00000206790 828 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm19134-201ENSMUST00000221203 487 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Lsm1Q8VC85 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm24067-201ENSMUST00000104514 85 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm15385-201ENSMUST00000118725 667 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm14559-201ENSMUST00000121745 496 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm24382-201ENSMUST00000122698 107 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm22530-201ENSMUST00000158820 118 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Mir6903-201ENSMUST00000183597 88 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm22868-201ENSMUST00000083955 164 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.03□□□□□ -1.76
Lsm1Q8VC85 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm22472-201ENSMUST00000104115 134 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm13478-201ENSMUST00000118312 413 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm15333-201ENSMUST00000118825 364 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm23743-201ENSMUST00000157389 274 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm23513-201ENSMUST00000158181 133 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm24224-201ENSMUST00000158828 258 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm7281-201ENSMUST00000160010 543 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm4842-201ENSMUST00000183237 835 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm27568-201ENSMUST00000184220 99 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm5368-201ENSMUST00000189012 589 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm29038-201ENSMUST00000191543 678 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm43649-201ENSMUST00000196596 391 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Mir142-201ENSMUST00000198092 64 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Gm4057-201ENSMUST00000221407 368 ntBASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lsm1Q8VC85 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms