Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm14836-201ENSMUST00000118567 471 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm12387-201ENSMUST00000118573 955 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm22519-201ENSMUST00000158270 178 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm2966-201ENSMUST00000166052 481 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm17204-201ENSMUST00000167936 478 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm20657-201ENSMUST00000177079 515 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Mir7087-201ENSMUST00000184840 70 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm5252-201ENSMUST00000189030 909 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm18303-201ENSMUST00000190055 1176 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm28467-201ENSMUST00000190981 318 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm5309-201ENSMUST00000197416 677 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Mir1892-201ENSMUST00000197752 80 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm33952-201ENSMUST00000197795 408 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm42593-201ENSMUST00000198469 377 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm42652-201ENSMUST00000199073 614 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm18268-201ENSMUST00000208445 943 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm3213-201ENSMUST00000219296 441 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm18442-201ENSMUST00000220925 639 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 AC158536.1-201ENSMUST00000222510 256 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 AC154562.1-201ENSMUST00000226140 966 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Mir331-201ENSMUST00000083673 96 ntBASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm15148-201ENSMUST00000117602 156 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm11262-201ENSMUST00000119326 833 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm15803-201ENSMUST00000120118 394 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm12706-201ENSMUST00000121588 698 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm13149-201ENSMUST00000122071 339 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm15077-201ENSMUST00000122344 362 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm25176-201ENSMUST00000122640 125 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm12226-201ENSMUST00000144172 876 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm24295-201ENSMUST00000158298 131 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm17655-201ENSMUST00000167969 255 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm8256-201ENSMUST00000169178 453 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Mir3090-201ENSMUST00000175597 87 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm27755-201ENSMUST00000184623 132 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm5511-201ENSMUST00000189380 802 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm21735-201ENSMUST00000190360 696 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm29038-201ENSMUST00000191543 678 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm37882-201ENSMUST00000195254 196 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm43586-201ENSMUST00000195948 310 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm21006-201ENSMUST00000196930 667 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Mir142-201ENSMUST00000198092 64 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm43554-201ENSMUST00000199987 186 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm44690-201ENSMUST00000207984 382 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm17850-201ENSMUST00000210023 1154 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc9Q8VC31 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms