Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Pcdhb7Q8CDY9 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 AC123858.1-201ENSMUST00000226948 1874 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm24889-201ENSMUST00000104388 132 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm23894-201ENSMUST00000158107 313 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm23343-201ENSMUST00000158964 143 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Mir7685-201ENSMUST00000183555 62 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm37746-201ENSMUST00000193249 198 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Igkv2-105-201ENSMUST00000196931 377 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm43739-201ENSMUST00000198294 307 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Mir7227-201ENSMUST00000200408 59 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm24695-201ENSMUST00000083877 83 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm10222-201ENSMUST00000088336 294 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Pcdhb7Q8CDY9 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Naip3-201ENSMUST00000118082 4208 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm22103-201ENSMUST00000116733 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm26475-201ENSMUST00000116769 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm23620-201ENSMUST00000116812 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm25042-201ENSMUST00000116856 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm25540-201ENSMUST00000116880 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm12939-201ENSMUST00000117303 165 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm11256-201ENSMUST00000118109 829 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm13455-201ENSMUST00000118767 517 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm11830-201ENSMUST00000120175 561 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm13338-201ENSMUST00000120235 361 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm11882-201ENSMUST00000121463 506 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm26046-201ENSMUST00000157312 166 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Mir3964-201ENSMUST00000174898 74 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm23550-201ENSMUST00000179003 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm25123-201ENSMUST00000179154 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm25353-201ENSMUST00000179366 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm22992-201ENSMUST00000179496 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm25892-201ENSMUST00000179867 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm24092-201ENSMUST00000180257 121 ntBASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdhb7Q8CDY9 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms