Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm23319-201ENSMUST00000104467 131 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm10241-201ENSMUST00000117664 286 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm12268-201ENSMUST00000118398 442 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm13690-201ENSMUST00000118989 285 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm14402-201ENSMUST00000122217 508 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm24727-201ENSMUST00000158231 144 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm6057-201ENSMUST00000195927 314 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm9251-201ENSMUST00000197202 628 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm19039-201ENSMUST00000204363 575 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NipblQ6KCD5 Mir101b-201ENSMUST00000083622 97 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
NipblQ6KCD5 Gm45235-201ENSMUST00000208016 4465 ntBASIC3.17□□□□□ -1.9
NipblQ6KCD5 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Svet1-201ENSMUST00000209370 3940 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm25765-201ENSMUST00000104100 132 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 AC140209.1-204ENSMUST00000226736 739 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm650-201ENSMUST00000144428 1551 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm13785-201ENSMUST00000119099 690 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm13508-201ENSMUST00000121639 775 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm38041-201ENSMUST00000194445 661 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm43005-201ENSMUST00000199015 648 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm43036-201ENSMUST00000200594 373 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Gm18602-201ENSMUST00000209794 851 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.16□□□□□ -1.9
NipblQ6KCD5 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NipblQ6KCD5 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NipblQ6KCD5 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NipblQ6KCD5 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NipblQ6KCD5 Gm45555-201ENSMUST00000210028 2602 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
NipblQ6KCD5 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC3.15□□□□□ -1.9
NipblQ6KCD5 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NipblQ6KCD5 Gm13761-201ENSMUST00000117238 807 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 Gm43521-201ENSMUST00000197838 255 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 Gm43107-201ENSMUST00000198729 255 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.15□□□□□ -1.9
NipblQ6KCD5 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.15□□□□□ -1.9
NipblQ6KCD5 AC162183.1-202ENSMUST00000225434 904 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC3.15□□□□□ -1.9
NipblQ6KCD5 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NipblQ6KCD5 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NipblQ6KCD5 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NipblQ6KCD5 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NipblQ6KCD5 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
NipblQ6KCD5 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NipblQ6KCD5 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NipblQ6KCD5 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
NipblQ6KCD5 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Gm12691-201ENSMUST00000120186 456 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Gm14369-201ENSMUST00000121355 285 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.15□□□□□ -1.91
NipblQ6KCD5 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Gm27828-201ENSMUST00000184108 119 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Gm18429-201ENSMUST00000198707 421 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Gm17829-201ENSMUST00000219782 344 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Gm3565-201ENSMUST00000222670 609 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Gm25818-201ENSMUST00000083282 164 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.15□□□□□ -1.91
NipblQ6KCD5 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms